Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 163 4e-35 seq1 109 7e-19 >seq3 Length=3676950 Score = 163 bits (180), Expect = 4e-35 Identities = 671/1047 (64%), Gaps = 27/1047 (3%) Strand=Plus/Minus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 111112 || |||||||| || ||||| | ||| | || | ||| ||||| || || || ||||| Sbjct 2184788 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 2184730 Query 111113 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 111169 ||| ||||| || | || | ||||| ||| || || ||| || | | Sbjct 2184729 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACGACC 2184672 Query 111170 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 || ||||| || || || || | | || | || ||||| ||||| | Sbjct 2184671 TTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCA 2184612 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || |||||||| || || | ||||| || || |||||| | | |||||| | Sbjct 2184611 GGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATG 2184552 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| ||| || || || | | || ||||| ||| | Sbjct 2184551 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 2184492 Query 111350 TT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 || ||| || ||||||||||||||| |||| || ||||| ||||| | | || || Sbjct 2184491 TTCGCA-GCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGAT 2184433 Query 111409 AGCCTTCCAAA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTA 111465 || ||| | | || | | || | || | ||| ||| | || | | |||||| Sbjct 2184432 GGCGAACCAGAGCTTCTGAGCCTTGATAGTCTTGCGA---CCCTTGCCGGCACGCTCGTA 2184376 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 | ||| || || ||||||||| |||||| ||| || || || | | Sbjct 2184375 GCTCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGC 2184316 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || || | || | ||| | || | ||| || ||||||||||| ||||| | || Sbjct 2184315 CGGGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGAT 2184256 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| |||| | ||||| || | ||| |||| || | || ||||| || | Sbjct 2184255 CCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAG 2184196 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 111705 || ||||| || | ||| || |||||||| ||||||||||||| |||| | ||| Sbjct 2184195 GTCGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCG- 2184137 Query 111706 TCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| ||| | || | || || || || || |||| | | || ||||| Sbjct 2184136 --GGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCAT 2184079 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTC 111817 || | ||||| | || | || || || || ||| ||||| | |||| | Sbjct 2184078 GGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCT--TGGCACGG 2184021 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | |||||||| | || ||||| || || ||| ||||| || ||||| | | Sbjct 2184020 ATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCTTG 2183961 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 ||||| | ||||| |||| ||| ||||||||||| |||||| |||||||||| ||| Sbjct 2183960 AGAGTGTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGAC 2183901 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 ||||| | || ||||| | |||||||| || || | ||||| |||| | Sbjct 2183900 ATCTGGGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGC 2183841 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | | ||| || ||| ||||| | ||| |||||||| || |||||||| || | Sbjct 2183840 TCGCTCATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACCAACG 2183781 Query 112058 GCGACCCGCATGAACATGTACTGTGGG 112084 | ||| ||||||| ||||| ||| ||| Sbjct 2183780 GAGACACGCATGAGCATGTGCTGGGGG 2183754 >seq1 Length=4840925 Score = 109 bits (120), Expect = 7e-19 Identities = 234/342 (68%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540 ||| ||||| |||| ||| |||| ||||||| | |||| || | |||||| ||||| Sbjct 902305 GAGCAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 902364 Query 122541 GAGGTTACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| ||| ||| || || || || |||| | | ||| |||| || ||||| || | Sbjct 902365 GAGCG-ACACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGA 902423 Query 122600 CGATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCACG 122658 ||| || ||| || |||| ||| || | || | | |||||||| | Sbjct 902424 TGATCTTGTTGATCGTGTCGGG-GTGCGGGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAG 902482 Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| || ||||| || || || || || || || ||||| || || Sbjct 902483 GCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCG 902542 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| || |||||||| | ||| | || | ||| ||| || || ||||||||||| Sbjct 902543 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCCAGAGAAGAAGAT 902601 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 |||||| || || || || | ||||| ||| |||| || Sbjct 902602 ACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGA 902643 Score = 105 bits (116), Expect = 8e-18 Identities = 117/151 (77%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| |||||||| |||||| ||||| || || |||||| | |||| |||||| || Sbjct 1301025 GTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGAAGGTCAAACCTCCCATGAGGCC 1301084 Query 122730 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 |||||||||| ||| | || || ||| |||||||| |||||||| || |||||||||| Sbjct 1301085 GCGCTTCTTCAGCCAGAAGATTGCTGCA-AATGACCCCGAGAAGAAAATGCCCTCCACAC 1301143 Query 122789 ACGCAAACGCAAAAAGGCGT-TCGGCGAAGG 122818 | || ||||| | | |||| |||| ||||| Sbjct 1301144 AGGCGAACGCGATCAAGCGTATCGG-GAAGG 1301173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031748787200