Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 221 1e-52 seq1 120 4e-22 >seq3 Length=3676950 Score = 221 bits (244), Expect = 1e-52 Identities = 687/1050 (65%), Gaps = 35/1050 (3%) Strand=Plus/Minus Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586 || |||||||| ||||||||||| || | ||||| || | ||| || || || || || Sbjct 2184788 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 2184730 Query 118587 GTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 118643 ||| ||||| || | || | | ||| ||| | || || |||||| ||| Sbjct 2184729 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACGACC 2184672 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 118703 || ||||| || || ||||| | | | || | | ||||| ||||| | | Sbjct 2184671 TTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCA 2184612 Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || |||||||| || || || || ||||| | |||||| | | |||||| || Sbjct 2184611 GGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATG 2184552 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| || ||| |||||||| | || || || || ||||| | Sbjct 2184551 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 2184492 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||| |||||| | || || ||||| || || | || || || Sbjct 2184491 TTCGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATG 2184432 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC------CTC 118936 || ||||| | || | || | | ||| ||| || |||| | ||| Sbjct 2184431 GCGAACCAGAGCTTCTGAGCCTTG-ATAGTC---TTG---CGACCCTTGCCGGCACGCTC 2184379 Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996 ||| | ||| || || ||||| ||| | | || | ||| || || || Sbjct 2184378 GTAGCTCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTC 2184319 Query 118997 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056 | ||||| | ||| | ||| | || | ||| || ||||||||||||||||| | Sbjct 2184318 GGCCGGGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGA 2184259 Query 119057 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 119116 ||||||||| || ||||||| || || ||| | || || | || || || ||| Sbjct 2184258 GATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACG 2184199 Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC 119175 | || | ||||| | ||| || |||||||| || || || || | |||| | ||| Sbjct 2184198 GAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACC 2184139 Query 119176 C-----CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 | ||| | | ||| |||||| || || | ||||| |||| | |||| || Sbjct 2184138 CGGGCGCTT--GTTG-CCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAG 2184082 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCT 119288 ||| || | |||||| | || | ||| || || || ||| ||||| | | |||| Sbjct 2184081 CATGGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCT--TGGCA 2184024 Query 119289 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 119348 | || | ||||||||| | ||| ||||| || || ||| ||||| || || || | Sbjct 2184023 CGGATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTC 2183964 Query 119349 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTC 119408 ||||| || ||||||| || ||||||||||| |||| | |||| |||||||| | Sbjct 2183963 TTGAGAGTGTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGAC 2183904 Query 119409 GACATTTGAGGCCTGGGT-GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACAT 119467 ||||| || ||| |||| ||||| | |||||||||||| || | |||||| |||| Sbjct 2183903 GACATCTG-GGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTA 2183845 Query 119468 ACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527 | | | ||| || ||||||||| | ||| |||||| || ||||| ||||| Sbjct 2183844 GCGCTCGCTCATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACC 2183785 Query 119528 GATCGAGACCCGCATAAACATGTATTGGGG 119557 | ||||| ||||| | ||||| ||||| Sbjct 2183784 AACGGAGACACGCATGAGCATGTGCTGGGG 2183755 >seq1 Length=4840925 Score = 120 bits (132), Expect = 4e-22 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||| ||| ||| || || ||||||||| || |||| |||||| || Sbjct 1301025 GTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGAAGGTCAAACCTCCCATGAGGCC 1301084 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| |||||| || || |||||| || |||||||| || ||||||||||| Sbjct 1301085 GCGCTTCTTCAGCCAGAAGATTGCTGCAAATGACCCCGAGAAGAAAATGCCCTCCACACA 1301144 Query 130147 CGCGAACGC 130155 |||||||| Sbjct 1301145 GGCGAACGC 1301153 Score = 118 bits (130), Expect = 1e-21 Identities = 289/433 (67%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||| |||||||||||| | ||| || | | ||| ||||||| || || || Sbjct 902204 ACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAG 902263 Query 129797 GGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGAC 129855 ||||| |||||||| | | || | |||| ||| ||||| |||| ||| Sbjct 902264 GGGTTGGACGAGTTCCAGACCTTCTCGTTG-CCAAGGGCGACGAGCAGACGGTCCGCGAC 902322 Query 129856 GTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGG-AGCG 129914 |||| ||||||| |||| || || |||||| |||||||| ||| ||| || | Sbjct 902323 AAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCG-ACACGGGGAGGG 902381 Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974 | || || |||| ||| ||| || | || || ||| | ||| || || || | Sbjct 902382 CCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTGT 902441 Query 129975 CCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGAC 130034 | | | || | ||| | | ||||||| |||||| || ||| || | Sbjct 902442 CGGGGTGCGGGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGC 902501 Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| || |||||||| || |||||||| || || |||||||| || ||||||| Sbjct 902502 CCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCT 902561 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 | | |||||| || | || ||||||||||||||||| ||||| || ||||| | Sbjct 902562 TGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAGG 902621 Query 130155 CAAAGAGACGCTC 130167 | | ||| ||||| Sbjct 902622 CGATGAGGCGCTC 902634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434952625920