Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 185 1e-41 seq1 116 4e-21 seq9 100 3e-16 >seq3 Length=3676950 Score = 185 bits (204), Expect = 1e-41 Identities = 673/1049 (64%), Gaps = 31/1049 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || | ||||| || || || |||||||| || Sbjct 2183754 CCCCCAGCACATGCTCATGCGTGTCTCCGTTGGTATCCACGGTGACGACATTGAGAAGGT 2183813 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | ||||| ||| || ||| | | | |||| ||||| | || || ||||| Sbjct 2183814 CATTGAGACCTACAACCTTATGAGCGAGCGCTACTTCACCCACGCCTCGCCCACTCTCTT 2183873 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| | ||||| || |||| ||||| |||||||||| |||||| |||||||| Sbjct 2183874 CAACTCGGGTACTCCCCACGCCCAGATGTCGTCTTGCTTCCTTGTCGCCATGAAGGAGGA 2183933 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||| ||||| | ||||| | | ||||| || ||||| ||| || || Sbjct 2183934 CTCGATCGACGGCATCTACGACACTCTCAAGACCTGTGCCCAGATCTCCAAGACTGCCGG 2183993 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 104518 ||||| || | |||||||| | | | |||| | ||||| ||| || || Sbjct 2183994 TGGTATCGGTCTCCACATCCACAACATCCGTGCCA--AGGGCTCGTACATTGCCGGAACC 2184051 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || | || | ||||| | || ||||| || | | |||| || || || || Sbjct 2184052 AACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTAC 2184111 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||| | ||| | |||| ||||||||||||| ||| Sbjct 2184112 GTCGACCAGGGTGGCAACAAGCGCC---CGGGTGCCTTCGCTATCTATCTTGAGCCCTGG 2184168 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || ||| | || ||||| || | ||| ||||| || | ||||||| || Sbjct 2184169 CACGCCGACATCTTCGACTTCCTCGACCTCCGTAAGAACCACGGAAAGGAGGAGGTTCGT 2184228 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| || ||||||| ||| |||||||| | || |||||||||||| | || ||| Sbjct 2184229 GCCCGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCC 2184288 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 ||| | ||| | ||| | || || | | || ||||| ||| |||| | | | Sbjct 2184289 GACGGCGACTGGACCCTCATGTGCCCGGCCGAGTGCCCTGGCCTCGCCGACGTCCACTCT 2184348 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAG------GAAGAAGGTCGGGCGACTGCG 104866 |||||||| || || ||| | |||||| | | ||||| |||| Sbjct 2184349 GAGGAGTTCGAGAAGCTGTACGAGAGCTACGAGCGTGCCGGCAAGGGTCGCAAGACTATC 2184408 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || ||| || | ||| || || || || |||| |||||||| ||| Sbjct 2184409 AAGG-CTCAGAAGC-----TCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTGGT 2184462 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||| ||||| ||||| |||| ||| || || || | | || Sbjct 2184463 CCCTTCATGCTCTACAAGGACGCTGCGAACCGCAAGTCCAACCAGCAGCACCTCGGCACC 2184522 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||| ||||| ||||| || || ||| | || | | |||||| || Sbjct 2184523 ATCAAGTCGTCCAACCTCTGCACTGAGATCATTGAGTACTCGTCTCCCGATGAGGTTGCC 2184582 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 ||||| ||||| || || ||||| ||||| | || | ||||| ||||| | Sbjct 2184583 GTGTGCAACCTTGCCTCGATCGCCCTCCCTGCCTTCGTCAACTTCGAGACCAAGACCTAC 2184642 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || || ||||| | || || |||||| ||||| || || || Sbjct 2184643 GACTTCAAGAAGCTGCACGAGATCACCAAGGTCGTCACCCGCAACCTTGACCAGGTCATC 2184702 Query 105167 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 | | || | |||||||| ||| || || || || || ||| | ||||| || Sbjct 2184703 ACTCGCAACTACTACCCCGTCCCCGAG---GCGCGCAACTCGAACATGCGCCACCGCCCC 2184759 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGA 105252 | ||||||||||| ||||||||||| || Sbjct 2184760 GTCGGTCTCGGTGTCCAGGGTCTCGCCGA 2184788 >seq1 Length=4840925 Score = 116 bits (128), Expect = 4e-21 Identities = 119/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| ||| |||| || || || |||||||||||||||||||| || ||| ||| | Sbjct 902634 GAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTC 902576 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | |||||||||||||| || |||||||| || ||| ||||| |||||||| || Sbjct 902575 CATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCAT 902516 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| || |||||||| || ||| || ||||| Sbjct 902515 CTCGCGCGACGAGGGCCTGCACACCGACTTTGC 902483 Score = 95.1 bits (104), Expect = 1e-14 Identities = 282/424 (67%), Gaps = 11/424 (3%) Strand=Plus/Minus Query 94525 ATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAA-TAACAACTT 94583 || ||||| |||||||| ||||||||| || || ||||| ||| | |||| || Sbjct 1301441 ATTCTGGCGTTCTTTGCGTCATCCGATGGTATCGTCGGAGAGAACCTCATCTCACAA-TT 1301383 Query 94584 TGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAATGA 94643 || ||| ||||| | | |||||| || |||||||||||| ||| | ||| Sbjct 1301382 CGCCACTGAAGTGCAGATCGCCGAAGCGCGAGCCTTCTATGCGTTCCAGACGATGATTGA 1301323 Query 94644 AATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGA 94703 ||| || | ||||| ||||| || || || | ||| | | || | || Sbjct 1301322 GCAGGTTCACGCCGAGACCTACAGCCTCCTGATCGAGACATATGTGCAAGACAAGGACGA 1301263 Query 94704 GAAGAAGCAGCTCTTTGAAGCCATCCA-AACAGTTCCGTGTATTCAAAAGAAAGCGGATT 94762 |||| | || || | | || | |||| |||| || || || ||||| || || | Sbjct 1301262 GAAGGACTTCCTGTTCAAGGGAATGGAGAACA-TTCCCTGCATCCAGAAGAAGGCCGACT 1301204 Query 94763 GGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAG-CGACTCTTCGCATTT 94821 |||| ||||||| | || | | || || || | || || | |||| || Sbjct 1301203 GGGCGATGAAGTACATC---ACCGA-TGATGTGCCCTTCCCGATACGCTTGATCGCGTTC 1301148 Query 94822 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAA 94880 || ||||| ||||| || |||||||| || || || ||| || || | ||||| ||||| Sbjct 1301147 GCCTGTGTGGAGGGCATTTTCTTCTCGGGGTCATT-TGCAGCAATCTTCTGGCTGAAGAA 1301089 Query 94881 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 94940 ||| || |||||| |||| | |||||| |||||||||||| || |||||||| || Sbjct 1301088 GCGCGGCCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGACGAGGGTCT 1301029 Query 94941 CCAC 94944 ||| Sbjct 1301028 GCAC 1301025 >seq9 Length=896563 Score = 100 bits (110), Expect = 3e-16 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 9752 ||| || | |||||||||||| || ||||||| |||||| || || ||| | || Sbjct 348323 CTTGCCGATGGCATCAATCTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCCGT 348264 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | | ||||| || || || || || ||| ||||| || ||||||||||| || | | Sbjct 348263 CG-CGAAGAGGTCGCGCACGCGGGAGGGGCCGACACCGACGAACATCTCCACGAACTCGG 348205 Query 9813 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 |||| || | || |||||| || || | || ||||| | || ||||| || Sbjct 348204 AACCGGA-CACAGAGAGGAAGGGCACCTTGGCCTCGCCCGCCGTCGCCTTCGCGAGCAGC 348146 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||||||||| || ||| || | ||||| ||| || || |||||||||||||| Sbjct 348145 GTCTTACCCGTTCCCGGCGGGCCGGAGAGGATGGCGCCGCGAGGAATCTTGGCGCC 348090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260566695680