Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 161 3e-34 seq9 132 1e-25 seq2 89.7 2e-12 >seq1 Length=4840925 Score = 161 bits (178), Expect = 3e-34 Identities = 587/913 (64%), Gaps = 13/913 (1%) Strand=Plus/Plus Query 349238 GCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACG 349297 || || ||||||||||| | || ||||| |||||||| || || || ||| | || || Sbjct 3046558 GCCGTCTGGCAAAATGACAGGGTCGAAATCATTGCAAACGACCAGGGAAACCGTACGACT 3046617 Query 349298 CCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAA 349357 || || ||||| || || ||||| | |||||| | || ||||| | || || || || Sbjct 3046618 CCTTCGTACGTCGCCTTCACCGACTCGGAGCGTCTCATCGGTGACGCCGCCAAGAACCAG 3046677 Query 349358 GCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTT 349417 | || || || | || || ||||| || || ||||| ||||| || | | || Sbjct 3046678 GTCGCGATGAACCCTTACAACACCGTTTTCGACGCCAAGCGTCTTATCGGCCGCAAGTTC 3046737 Query 349418 TCTGAC----AAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAA 349473 |||||| | || || || || | || || | || || | || | | | | Sbjct 3046738 TCTGACGCCGAGGTC----CAGTCCGACATGAAGCACTGGCCCTTCAAGGTCAT-CGACA 3046792 Query 349474 AGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACC 349533 || || || || || |||| || || ||||| || || || || | || Sbjct 3046793 AG--GGAACCAAGCCCTACATCCAGGTCGAGTACCGCGGTGAGCAGAAGCAGTTCTCTCC 3046850 Query 349534 CGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG 349593 ||| || || || || ||||| | | || |||||||| | || || || || | || Sbjct 3046851 CGAGGAGATCTCGTCCATGGTCCTCATCAAGATGAAGGAGACCGCCGAGGCCTACCTTGG 3046910 Query 349594 TGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTC 349653 || || || | | ||||| || ||||| || ||||| || || || | |||||| Sbjct 3046911 TGGCACCGTCTCCAAGGCTGTCATCACTGTCCCCGCCTACTTCAACGACTCGCAGCGTCA 3046970 Query 349654 TGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 || || || || || || | ||| | || | | || || | || || || || || Sbjct 3046971 GGCCACCAAGGACGCCGGTACCATCTCTGGTCTTGAGGTCCTCCGTATCATCAACGAGCC 3047030 Query 349714 CACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCT 349773 ||| || || || || || || || || || || | || || || || || |||| Sbjct 3047031 CACCGCCGCCGCCATCGCCTACGGTCTCGACAAGAAGACCGAGGGTGAGAAGAACGTTCT 3047090 Query 349774 TATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAAT 349833 || || || | ||||||||||| || ||||| || || || || | || ||||| || Sbjct 3047091 CATCTTCGACCTTGGTGGTGGTACCTTCGATGTCTCTCTTCTTACCATCGAGGAGGGCAT 3047150 Query 349834 TTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || || || || || || || ||||| || || |||||||| || || ||||| || || Sbjct 3047151 CTTCGAGGTCAAGGCTACCGCCGGTGACACCCACCTTGGTGGTGAGGACTTTGACAACCG 3047210 Query 349894 TCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATA 349952 |||||| || || || | || || ||||| |||| || | || | | | Sbjct 3047211 TCTCGTCAACCACTTCGTCCAGGAGTTCAAGCG-CAAGAACAAGAAGGACCTGACCGGCA 3047269 Query 349953 ATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCAT 350012 | | | || | ||||| || | || ||||| || ||||| ||||| | | || | Sbjct 3047270 ACGCCCGTGCCCTCCGTCGTCTCCGCACCGCGTGCGAGCGTGCCAAGCGCACTCTCTCGT 3047329 Query 350013 CTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCAT 350072 || | |||| ||||| || || || || || || || || | || |||| | | Sbjct 3047330 CTGCCGCCCAGACCTCGATCGAGATCGACTCGCTCTTCGACGGTATCGACTTCTACACCT 3047389 Query 350073 CTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATC 350132 | || || ||||| || || || || | || ||| || || | | || ||||| | Sbjct 3047390 CGATCACCCGTGCCCGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGC 3047449 Query 350133 CTGTGGAAAAAGT 350145 | || || || || Sbjct 3047450 CCGTTGAGAAGGT 3047462 >seq9 Length=896563 Score = 132 bits (146), Expect = 1e-25 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| ||||| || ||||| || || || Sbjct 20962 CATACCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTC 20903 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || || ||||| || || ||||| ||||| Sbjct 20902 CGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGG 20843 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| || || || ||||| || || ||| || || || || |||| || || | | Sbjct 20842 GGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAAGACT 20784 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| |||| ||||| || || || || || || || |||||||| Sbjct 20783 CGACCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || || || |||||||| || || || || || || || | || || ||||| Sbjct 21171 AGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCC 21112 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||||||||| || || ||||| || ||||| ||||| || || ||| Sbjct 21111 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 21052 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || | || || || || || | || || | ||||| || || || | ||| Sbjct 21051 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTC 20992 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 20991 TTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 >seq2 Length=4481979 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 720212 ATACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 720153 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 720152 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGG 720093 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || || | || || || || || | || || | || Sbjct 720092 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCG 720033 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || |||| ||||| ||||| || Sbjct 720032 ACCTCGAGAGTAATGGTCTTACCGGTGAG 720004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253778745696