Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 327 1e-84 seq4 181 1e-40 >seq3 Length=3676950 Score = 327 bits (362), Expect = 1e-84 Identities = 540/777 (69%), Gaps = 14/777 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||| || | |||||||||||||||||| | ||| |||||| ||| Sbjct 2183768 TCATGCGTGTCTCCGTTGGTATCCACGGTGACGACATTGAGAAGGTCATTGAGACCTACA 2183827 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | |||||| | ||||| || |||||| |||| || || |||||| | ||||| Sbjct 2183828 ACCTTATGAGCGAGCGCTACTTCACCCACGCCTCGCCCACTCTCTTCAACTCGGGTACTC 2183887 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| | ||||||||| |||||||| || || |||||||| |||||||||||||||| Sbjct 2183888 CCCACGCCCAGATGTCGTCTTGCTTCCTTGTCGCCATGAAGGAGGACTCGATCGACGGCA 2183947 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| |||||||| ||||||||| | |||||||||||| ||| Sbjct 2183948 TCTACGACACTCTCAAGACCTGTGCCCAGATCTCCAAGACTGCCGGTGGTATCGGTCTCC 2184007 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | ||| ||||||| || ||| | || || || |||||| | | | | Sbjct 2184008 ACATCCACAACATCCGTGCCAAGGGCTCGTACATTGCCGGAACCAACGGCTACTCGAACG 2184067 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||||| || |||||||| | || | || || || || |||||| |||||||||| Sbjct 2184068 GTATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTACGTCGACCAGGGTGGCA 2184127 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| ||| | ||||| ||||| || ||||| |||||||||||||| | || | Sbjct 2184128 ACAAGCGCCCGGGTGCCTTCGCTATCTATCTTGAGCCCTGGCACGCCGACATCTTCGACT 2184187 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671 | ||||| || ||| ||| || || | || ||| | || ||||||||| || ||| Sbjct 2184188 TCCTCGACCTCCGTAAGAACCACGGAAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTAC- 2184246 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| | |||||||||||| | || ||| |||| || ||| ||| Sbjct 2184247 GCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCCGACGGCGACTGGACCCTC 2184306 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 ||||||||| ||||||||| |||||| | ||| || ||||||||| | || || Sbjct 2184307 ATGTGCCCGGCCGAGTGCCCTGGCCTCGCCGACGTCCACTCTGAGGAGTTCGAGAAGCTG 2184366 Query 53792 TATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 || || ||| || | |||| ||| |||| ||||||| | || Sbjct 2184367 TACGAGAGCTACGAGCGTGCCGGCAAGGGTCGC------AAGACTATCAAGGCTCAGAAG 2184420 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| || ||||| || ||| ||||| || || | |||| ||||||| Sbjct 2184421 CTCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTGGTCCCTTCATGCTCTACAAG 2184480 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 || | | ||| ||| ||||||| || || ||||| |||||| ||| |||| Sbjct 2184481 GACGCTGCGAACCGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAAC 2184537 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| || ||| ||| || |||||||| | |||||| | || ||| | || Sbjct 2185286 TCAAGGCCATCTACAAGACTGTCTGGGAGATCTCGCAGAAGGCGGTTATCGACCTCGCTG 2185345 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| |||||||||||| ||||| || |||||| | | | ||| || | Sbjct 2185346 CCGACCGTGGAGCGTTCATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCGAACCCCT 2185405 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | || | | |||||||||||| ||||| |||||| || |||||||| ||| Sbjct 2185406 CGTTCTCGCAGCTCACCTCGATGCACTTCTACGGCTGGAAGCGCGGTCTCAAGACCGGTG 2185465 Query 55908 TGTACTATCTGCGGACCCG 55926 ||||| || || ||||| Sbjct 2185466 CCTACTACCTCCGCACCCG 2185484 Score = 89.7 bits (98), Expect = 6e-13 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| | ||||| ||||| | || || || || || ||||| ||| ||||||| Sbjct 2184643 GACTTCAAGAAGCTGCACGAGATCACCAAGGTCGTCACCCGCAACCTTGACCAGGTCATC 2184702 Query 55157 GACAAG-AATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCAT 55215 || | || |||||||| | ||||||||| || ||| | || ||||| ||| | Sbjct 2184703 -ACTCGCAACTACTACCCCGTCCCCGAGGCGCGCAACTCGAACATGCGCCACCGCCCCGT 2184761 Query 55216 CGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTC 55275 || ||||||| ||||| | ||||||| ||||||| ||| | ||||||||||||| Sbjct 2184762 CGGTCTCGGTGTCCAGGGTCTCGCCGACACCTTCATGGCCCTCCGCATGCCCTTCGACTC 2184821 Query 55276 GGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCG 55334 | ||||| | | |||| | |||||| || | ||||||| || || |||| Sbjct 2184822 GCGTGAGGCTCGCCAGCTCAACCTCCAGATCTTCGAGAC-CATCTACCACGCTGCCCTCG 2184880 Query 55335 AGGAGTCGTG 55344 ||| ||||| Sbjct 2184881 AGGCTTCGTG 2184890 >seq4 Length=2479610 Score = 181 bits (200), Expect = 1e-40 Identities = 316/457 (69%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| |||||||| ||||| || || ||||| | ||| || |||||||| | |||| || Sbjct 1257667 CCAGTACCGATACCGTCTGCTCCGTTGATCAGGACCATGGGAACGACAGGCATGTAGTAC 1257726 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | ||||| || || || || || ||||| | | | || || Sbjct 1257727 TCGGGCTCGATGTGCAGGCCTTCCTCGAAGAGGTTGTTGAGGATGGGCTCATCCGCTGGG 1257786 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGA-------GTGAAAATGTAACGAGAGCT 117324 | ||| ||| | ||| | ||| |||| |||||||||||||||| || Sbjct 1257787 TGGAAGATGGTGCGGGT----GATGC---GCGACACATTGGTGAAAATGTAACGAGCACT 1257839 Query 117325 TGCAGCATCCTTGCCA-CCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 ||||||||||| ||| || |||| |||||||||||| || || | ||| ||| ||||| Sbjct 1257840 GGCAGCATCCTTACCACCCTGCAA-ACGCGTACCGAACTGACCGTTGGGCGCCAGGAGGT 1257898 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 | | ||||||| ||| | ||||| || || | | ||||| || | || || Sbjct 1257899 TGATGTTGTTGCTGCCGATGAAGTTCTGGGCAAGGCCAACAATTGTCGAGTACAGAGACG 1257958 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCA 117503 |||||| ||||| || ||||| | |||| |||||| || | | ||| |||||| | Sbjct 1257959 TCTCACCGTGGTGGTAGGCCGTGTTCTCCATCACGTAACCAACGACCTGCTGCACCTTGA 1258018 Query 117504 TGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 | | | | |||||||||| |||| | |||| ||||||||||||| ||||||| Sbjct 1258019 TCTGGTTTTTGATCTTCTTCTTGAAGCAGCCGAAAATGACCTTGCGCTGACCAGGCTTCA 1258078 Query 117564 GACCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600 | || || || || |||||| ||||| || |||| Sbjct 1258079 GGCCGTCGGCGACCGAAGGGATGGAACGGATGTTGTC 1258115 Score = 138 bits (152), Expect = 1e-27 Identities = 301/451 (67%), Gaps = 0/451 (0%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| |||||||| || ||||| ||||||| ||| | ||| || || | ||| ||| Sbjct 1257665 ATCCAGTACCGATACCGTCTGCTCCGTTGATCAGGACCATGGGAACGACAGGCATGTAGT 1257724 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 |||| ||||| | || | || || || | | || || | | || | || || | Sbjct 1257725 ACTCGGGCTCGATGTGCAGGCCTTCCTCGAAGAGGTTGTTGAGGATGGGCTCATCCGCTG 1257784 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 | | ||| || || || || | || | ||||| ||||| || | ||||| | Sbjct 1257785 GGTGGAAGATGGTGCGGGTGATGCGCGACACATTGGTGAAAATGTAACGAGCACTGGCAG 1257844 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 ||||||| ||||| || ||||| || ||||| || |||| | |||||||||| || Sbjct 1257845 CATCCTTACCACCCTGCAAACGCGTACCGAACTGACCGTTGGGCGCCAGGAGGTTGATGT 1257904 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 ||||| ||| | ||| ||||| || | ||||| || | |||| || |||| Sbjct 1257905 TGTTGCTGCCGATGAAGTTCTGGGCAAGGCCAACAATTGTCGAGTACAGAGACGTCTCAC 1257964 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 ||||||| || ||||| | |||| | ||| || | | |||| |||||| || | Sbjct 1257965 CGTGGTGGTAGGCCGTGTTCTCCATCACGTAACCAACGACCTGCTGCACCTTGATCTGGT 1258024 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 | | | |||||||||| ||| || |||| ||||||||||| || |||| |||| Sbjct 1258025 TTTTGATCTTCTTCTTGAAGCAGCCGAAAATGACCTTGCGCTGACCAGGCTTCAGGCCGT 1258084 Query 152294 CCACCACGTGAGGAATCGAACGCTTGATGTC 152324 | | || ||| || ||||| || |||| Sbjct 1258085 CGGCGACCGAAGGGATGGAACGGATGTTGTC 1258115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215781113600