Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9 145 7e-30 seq2 102 7e-17 seq3 87.8 2e-12 >seq9 Length=896563 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||||||| | || ||||| || || || | || Sbjct 20504 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 20563 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 20564 GACACGATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 20623 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| ||| | || ||| || ||| | ||||| |||||| Sbjct 20624 CAGCGTCTCATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACCCTGTCCGACTACAAC 20683 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || | || | ||| |||| ||||| || Sbjct 20684 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGTCTGCGCGGTGGTAT 20733 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| || ||| | ||||| ||||| || || | ||| Sbjct 20732 ATGCAGATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTTGAGGTCGAGTCTTCC 20791 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || || || || || || || Sbjct 20792 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 20851 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| || ||| | || || |||||| Sbjct 20852 CAGCGCCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCGGACTACAAC 20911 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || | || | || |||| ||||| || Sbjct 20912 ATTCAGAAGGAGTCGACTCTTCACCTTGTGCTCCGCCTGCGTGGTGGTAT 20961 >seq2 Length=4481979 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||| ||| | |||||||| || || || | || ||| | || || | ||||| Sbjct 720004 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 720063 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 720064 TCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 720123 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| | ||||| |||||||| || |||||||||||| | Sbjct 720124 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 720183 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || ||||| || Sbjct 720184 CACCTCGTCCTCCGTCTCCGTGGTGGTAT 720212 >seq3 Length=3676950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 ||||| |||||| | || || ||||| || || | |||||| | || || | ||||| Sbjct 1427131 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG 1427072 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || || || || || || || |||||| | || | ||| ||| Sbjct 1427071 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGC 1427012 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| | || || |||||||| || |||||||||||| | Sbjct 1427011 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTC 1426952 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGG 27214 || | || | ||| | || ||||| Sbjct 1426951 CACCTTGTCCTCCGTCTTCGCGGTGG 1426926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918226032640