Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 141 8e-29 >seq1 Length=4840925 Score = 141 bits (156), Expect = 8e-29 Identities = 332/495 (67%), Gaps = 31/495 (6%) Strand=Plus/Plus Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAG--CGGGGGTTCCCATC-TCGG 34387 |||||||||| ||| ||| || || || || ||| ||| ||||||| |||| Sbjct 3936513 ATCTGGGACGGCAACGCGTCCCGCGAGTTCCTCGACCGTGTCGGCCTCTCCCATCGTCGG 3936572 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 || | ||||| ||||||| || ||||||||||||||| | ||||| || || |||| Sbjct 3936573 GAAG---GCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGCCACTTCGGCGCCAAGTAC 3936629 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGA 34506 | | |||| | || || |||| || || | ||||| || || | ||| || Sbjct 3936630 GGAACGTGCGAGGACGATTACACGGGCCAAGGGGTCGACCAACTCGCCGAGTGTGTCCGG 3936689 Query 34507 CACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGA 34566 | || ||| |||||| || ||||||| | ||| | || ||||||||| || Sbjct 3936690 AAGATT-AAGGAGAACCCGACGGATCGAAGGATTATCATGAGTGCTTGGAACCCGGCCGA 3936748 Query 34567 TCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT-------CG 34619 || |||||||||||||||||||||||||||| ||||||| |||| ||| | Sbjct 3936749 CCTGCCTCTGATGGCGCTCCCCCCGTGCCACATGTTCTGCCAGTTCTTCGTTCACCTCCC 3936808 Query 34620 CGA-----ATGGGGAG---------CTGTCCTGCCAGCTCTATCAACGATCGGGAGACAT 34665 ||| | || ||| || ||||| | || || || || | ||| | Sbjct 3936809 CGAGTCCGAGGGCGAGAAGCCAGGCCTCAGCTGCCTCATGTACCAGCGTTCCTGCGACGT 3936868 Query 34666 GGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||| | || ||||||||||||||||| || ||||| ||||| ||| ||||| |||| Sbjct 3936869 GGGACTCGGCGTGCCGTTCAACATTGCCAGCTACGCGCTGCTGACGCACATGGTCGCGTT 3936928 Query 34726 TGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATAC-GTTGGGGGATGCGCATATCTACC 34784 ||| ||||| | || | ||| | | | | | | ||||||| |||||| | |||| Sbjct 3936929 TGTGACGGGGTGCGAGCCGCGCGAGTTCAT-CTTGCAGATGGGGGACGCGCATGTGTACC 3936987 Query 34785 TGAACCACATCGAGC 34799 | |||| | |||| Sbjct 3936988 GGGACCATGTTGAGC 3937002 Score = 141 bits (156), Expect = 8e-29 Identities = 332/495 (67%), Gaps = 31/495 (6%) Strand=Plus/Minus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAAC-GTATGCACCAGCTCCCCAGGA 6604 |||| | |||| | |||| | |||||| ||||||| | | | | | | ||| | || Sbjct 3937002 GCTCAACATGGTCCCGGTACACATGCGCGTCCCCCATCTGCAAG-ATGAACTCGCGCGGC 3936944 Query 6605 ACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAAC 6664 | ||||| ||| |||| ||||| ||| ||||| ||||| || |||||||||||| Sbjct 3936943 TCGCACCCCGTCACAAACGCGACCATGTGCGTCAGCAGCGCGTAGCTGGCAATGTTGAAC 3936884 Query 6665 GGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAG---------C 6715 ||||| || | |||| ||| | || || || || | ||||| || | Sbjct 3936883 GGCACGCCGAGTCCCACGTCGCAGGAACGCTGGTACATGAGGCAGCTGAGGCCTGGCTTC 3936824 Query 6716 TCCCCAT-----TCGCG-------ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGC 6763 || || | ||| | ||| |||| ||||||| ||||||||||||||||| Sbjct 3936823 TCGCCCTCGGACTCGGGGAGGTGAACGAAGAACTGGCAGAACATGTGGCACGGGGGGAGC 3936764 Query 6764 GCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGG 6823 ||||||||||| || || ||||||||| || | ||| | ||||||| || ||| Sbjct 3936763 GCCATCAGAGGCAGGTCGGCCGGGTTCCAAGCACTCATGATAATCCTTCGATCCGTCGGG 3936704 Query 6824 TTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTC 6882 ||| ||| || | || ||| | || || ||||| | || || |||| || || Sbjct 3936703 TTCTCCTT-AATCTTCCGGACACACTCGGCGAGTTGGTCGACCCCTTGGCCCGTGTAATC 3936645 Query 6883 CGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 | |||| | | |||| || || ||||| | ||||||||||||||| || ||||| Sbjct 3936644 GTCCTCGCACGTTCCGTACTTGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCC 3936585 Query 6943 CAAGTCGCCCTCCTCCCGA-GATGGGAACCCCCG--CTTGTCCAGAAAGTCTCGAGACCC 6999 || ||||| | |||||| ||||||| ||| ||| || || || || ||| | Sbjct 3936584 CAGGTCGC---CTTCCCGACGATGGGAGAGGCCGACACGGTCGAGGAACTCGCGGGACGC 3936528 Query 7000 GTGAGCGTCCCAGAT 7014 || |||||||||| Sbjct 3936527 GTTGCCGTCCCAGAT 3936513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262220695040