Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9 111 4e-19 seq2 87.8 4e-12 seq3 86.0 1e-11 >seq9 Length=896563 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || |||||||| || ||||||||||| || | | || | ||||| Sbjct 21171 AGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCC 21112 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || | ||||||||| | | |||||| ||||| | Sbjct 21111 TCGAGCTGCTTT--CCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGT 21054 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || ||||| | || | | |||| || ||| || || || || || | Sbjct 21053 CCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCG 20994 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| |||||||| |||| |||||| Sbjct 20993 TCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| |||||||| ||||| || || |||||||| || | | || | || || Sbjct 20944 GAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTC 20885 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||||||||| | ||||||||| | | || || ||||| || Sbjct 20884 CTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 20825 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || | || | |||| ||| ||| || ||||| ||||| || Sbjct 20824 CTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGT 20765 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| |||||||| ||||||| |||||| Sbjct 20764 CTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || ||||| || ||||||||||| |||| | || | || || Sbjct 20715 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCC 20656 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||||||||| | | ||| || ||||| || Sbjct 20655 TCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 20596 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | |||| || ||| || || ||||| || || Sbjct 20595 TGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 20536 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| || |||| |||||| Sbjct 20535 TTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 >seq2 Length=4481979 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| |||| | || | Sbjct 720201 GAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 720142 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||| | | || || || Sbjct 720141 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTC 720082 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || || ||||| Sbjct 720081 CTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGT 720022 Query 152066 AATAGTTTTGCCCGTGAG 152083 ||| || || || ||||| Sbjct 720021 AATGGTCTTACCGGTGAG 720004 >seq3 Length=3676950 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || ||||| || ||||||||||| || | | || | || || Sbjct 1426940 GAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTC 1426999 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||| | | ||| || ||||| || Sbjct 1427000 CTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 1427059 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| || ||| || ||||| || || || Sbjct 1427060 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGT 1427119 Query 152072 TTTGCCCGTGAG 152083 |||||||| || Sbjct 1427120 CTTGCCCGTCAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820326933472