Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9 176 9e-39 seq2 147 5e-30 seq3 138 2e-27 seq1 111 3e-19 >seq9 Length=896563 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || || ||||||||||| | Sbjct 20959 ACCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGA 20900 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||| | || || |||||| || Sbjct 20899 GAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGG 20840 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||||||| |||||||| ||| || ||| | ||||| ||||| |||| |||| Sbjct 20839 AATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGA 20781 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || |||||||||||||||| |||||| ||||| |||||||| Sbjct 20780 CCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| || || || | || || || |||||||||||||| | Sbjct 20731 ACCACCGCGCAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 20672 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| ||||| || ||||||||||| | ||| || ||||| || Sbjct 20671 CAGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGG 20612 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || ||| | ||||| |||||||| | ||||| Sbjct 20611 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 20552 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | |||||| || || |||||||| Sbjct 20551 CTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| ||||| || | ||| || || |||||||||||||| | Sbjct 21186 CCTCCACGGAGACGAAGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAG 21127 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || |||||||| || || || || |||||||||| || || ||||| || Sbjct 21126 AGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGG 21067 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | ||||| |||||||| | || || Sbjct 21066 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACC 21007 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||||||||| | ||||| || || |||||||| Sbjct 21006 TCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 >seq2 Length=4481979 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 720210 ACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 720151 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 720150 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 720091 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 720090 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 720031 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||||| || |||||||| || Sbjct 720030 CTCGAGAGTAATGGTCTTACCGGT 720007 >seq3 Length=3676950 Score = 138 bits (152), Expect = 2e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | || || || |||||||||||||| | Sbjct 1426925 ACCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1426984 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || || || ||||| | ||| || |||||| || Sbjct 1426985 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGG 1427044 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 1427045 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 1427104 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || || ||||| ||||| ||||||| Sbjct 1427105 CTCAAGGGTGATGGTCTTGCCCGTCA 1427130 >seq1 Length=4840925 Score = 111 bits (122), Expect = 3e-19 Identities = 536/834 (64%), Gaps = 25/834 (3%) Strand=Plus/Minus Query 229558 TCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGGACCACGGAGGAAGTCCCCCTAA 229617 ||||| | ||||| ||||||||| ||| | || |||||| | ||||| || ||| Sbjct 903035 TCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTCG 902976 Query 229618 ATGCAGACGTCGTCGACTGGCGCGAGAAACTCAACGACGATGAACGCCATTTCATCAAGC 229677 | ||| || ||||||| | | ||||| |||||| | || ||| | |||||| ||| Sbjct 902975 CCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAGC 902916 Query 229678 ACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCGTGATGGAAAACTT-GCAGACTAAC 229736 || | |||| || || || | || ||||||||||| | || ||| | | || | Sbjct 902915 ACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCG-C 902857 Query 229737 TTCAGCGTCGAAGTAACGGTCCCAGAGGCACGGCAGTTTTACGCATACCAGACGTTCAAT 229796 ||| ||| || || | || | ||||| | ||| |||| | ||||| | | Sbjct 902856 TTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATG 902797 Query 229797 GAATCTGTTCATTCGGAACAGTATGCCCTTCTTATTGACGCGCTCATTTCCGACGAGCGA 229856 || | || ||||| ||| | || || || ||| || ||| |||| | || Sbjct 902796 GAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACAA-CGC 902738 Query 229857 GAGCGTGCCGAAC-TGTTCGACGCCATCGAAAACATCCCGGCGGTCCATAACAAAGCGCG 229915 || || | || ||||| | |||||||| | |||||| || | || || || Sbjct 902737 CCGCCGGCAGTACCTGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGA 902678 Query 229916 TTGGGCTCAGAAGTGGCT---GGAACCCAGTAAATCGTTTGCAGAGCGTCTCGTCGCGTG 229972 ||||||| ||| | ||| | || ||||| | ||||| ||| |||| | Sbjct 902677 CTGGGCTCTCCGCTGGATCTCGGACCAGCGTTCGTCGTTCGGCGAGCGCCTCATCGCCTT 902618 Query 229973 GGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCG-CCATCTTTTGGCTACGCA 230031 | ||| |||||||| | ||||| || ||| ||| ||||||| ||||| || Sbjct 902617 CGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTCCATCTTCTGGCT---CA 902562 Query 230032 ACAAGGGCG---TCATGCCCGGGCTCGGTCTGTCGAACGAATTCATCAGCAGGGACGAAG 230088 | ||| ||| |||||||||| ||| | |||||||| ||||| | ||||| | Sbjct 902561 AGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAGG 902502 Query 230089 GTCTTCACCAGCAATTTGGCGAGGTCTTGTATTC--GAAGCTAAATAACAAACTACCTTT 230146 | || ||| | |||| | | || | ||| | | || | | | Sbjct 902501 GCCTGCACACCGACTTTGCCT--GCCTGCTCTTCACGCACCTCCGCCGCCGCCCGCACCC 902444 Query 230147 CGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAA-AT-GAAAAGGAGTTCATTTGC 230204 ||| ||| | || | ||| ||| || | || ||| || || |||||||| | | Sbjct 902443 CGACACGATCAACAAGATCATCAAGGAGGCCGT--CAAGATCGAGCAGGAGTTCCTCACC 902386 Query 230205 GACGCTATTCCT-TGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGA 230263 || || | || || || || ||||||||||| || | |||||| | || || ||||| Sbjct 902385 GAGGCCCTCCCCGTGTCG-CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGA 902327 Query 230264 ATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAA 230323 || || || || ||| | |||| || || || ||||||| || | ||||| || Sbjct 902326 GTTTGTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAGGTCTGGAACTCGTCCAA 902267 Query 230324 CCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGA 230377 |||||||| || |||||| | || || |||||||| || | ||||||||||| Sbjct 902266 CCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 902213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738770836928