Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq9 143 2e-29 seq2 111 1e-19 seq3 102 6e-17 >seq9 Length=896563 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| ||||| |||||| ||||||||||| || | ||| || | || || Sbjct 21168 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCG 21109 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||||| || | ||| | || ||||| ||| Sbjct 21108 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGA 21049 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || || ||||||| ||| |||||||| Sbjct 21048 ATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTA 20989 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||||||| ||||| ||||| Sbjct 20988 CCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| |||||||| || |||||| || |||||||| || Sbjct 20962 CATACCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTC 20903 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| || || ||||| | |||||||| || | Sbjct 20902 CGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGG 20843 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| ||||| ||||| | | || ||||||| || || Sbjct 20842 GGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTC 20783 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct 20782 GACCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| |||| || ||| |||| || Sbjct 20712 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 20653 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||| | ||||||||| || | || | || ||||| ||| Sbjct 20652 AGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 20593 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || ||||| | || || ||||| Sbjct 20592 ATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTG 20533 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| || ||||| ||||| Sbjct 20532 CCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 |||| || |||||||| || || || || | ||||||||| || | ||| | ||||||| Sbjct 20383 CGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCT 20324 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300 | ||| |||||| ||| | | | |||||||||| || || ||||| | || | Sbjct 20323 TGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGA 20264 Query 44301 TCGTCTTTCCCGTGAGGGTCTT 44322 | ||||| || ||||||||||| Sbjct 20263 TGGTCTTGCCGGTGAGGGTCTT 20242 >seq2 Length=4481979 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 720191 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 720132 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | || ||||| ||| Sbjct 720131 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 720072 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | ||| || ||||| | ||||| ||||| Sbjct 720071 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTA 720012 Query 44309 CCCGTGAGG 44317 || |||||| Sbjct 720011 CCGGTGAGG 720003 >seq3 Length=3676950 Score = 102 bits (112), Expect = 6e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 1426944 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 1427003 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | || | ||| ||||| ||| Sbjct 1427004 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 1427063 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| ||| || ||||| | || || ||||| Sbjct 1427064 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1427123 Query 44309 CCCGTGAGG 44317 ||||| ||| Sbjct 1427124 CCCGTCAGG 1427132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990259603744