Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9 161 9e-35 seq2 127 2e-24 seq3 123 2e-23 seq1 100 3e-16 >seq9 Length=896563 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||||||||||||||| ||||| ||| Sbjct 20958 CCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 20899 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || |||||||| || ||||| || |||||||| ||||| | |||| Sbjct 20898 AGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 20839 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| ||| | | | |||||| ||||| || Sbjct 20838 ATACCCTCCTTGTCCTGGATCTTGCTCTTC-ACGTTGTCGATCGTGTCGGAAGACTCGAC 20780 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct 20779 CTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || ||||| ||||||||| ||||| ||||| ||| Sbjct 21186 CCTCCACGGAGACGAAGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAG 21127 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| || || || ||||||||||| ||||| | || Sbjct 21126 AGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGG 21067 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || | | ||| | | | ||||| |||||| || Sbjct 21066 ATTCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAAC 21008 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| ||||| |||||||| || ||||| || || |||||||| Sbjct 21007 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 20730 CCACCGCGCAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20671 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| ||||||||||| || || || ||||| ||||| | ||| Sbjct 20670 AGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGG 20611 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | ||| | | | ||||| ||||| || Sbjct 20610 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 20552 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| || || |||||||| Sbjct 20551 CTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| ||||||||||| || ||||| || || ||||| ||| Sbjct 20402 TAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGG 20343 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | || | || ||||||||| ||| || ||| ||| | | | |||||| Sbjct 20342 TCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTGTCGGA 20284 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 |||||| ||||| | || || || || || || || ||||| Sbjct 20283 CGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 20242 >seq2 Length=4481979 Score = 127 bits (140), Expect = 2e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| ||||||||| Sbjct 720209 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 720150 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || || ||||| ||||| | |||| Sbjct 720149 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 720090 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 720089 ATGCCCTCCTTGTCCTGGATCTT 720067 >seq3 Length=3676950 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || ||||| ||||| | || || || || || ||||||||| ||||| ||||| Sbjct 1426923 CCACCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 1426982 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||||||||| ||||| || || ||||| ||||| | | Sbjct 1426983 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGG 1427042 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | | |||||||||| ||| || ||| ||| | | | |||||| ||||| Sbjct 1427043 GGGATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAGGACTC 1427101 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAG 41841 ||||| | || || || || |||||||| Sbjct 1427102 GACCTCAAGGGTGATGGTCTTGCCCGTCAG 1427131 >seq1 Length=4840925 Score = 100 bits (110), Expect = 3e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || || || |||||||| ||||||||| |||||||| |||||||| ||| Sbjct 2504453 CGCATCGCGCCGCGCTCGGGCCTCGCGGCCAAGCACGGCATCGACGTCGGCGCCGGCGTC 2504512 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCAC 85907 ||||| |||||||||||| | |||| |||| |||||||||||| Sbjct 2504513 GTCGACTGCGACTACCGCGGCGAGGTCAAGGTCGTCCTCTTCAACCAC 2504560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303815078400