Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 107 4e-18 seq2 93.3 9e-14 >seq7 Length=1807069 Score = 107 bits (118), Expect = 4e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| | || ||| | ||||||||||| || || ||||||||| | Sbjct 104114 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGCCTG 104173 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || ||| |||| || || | ||||| |||||||| | || |||||| Sbjct 104174 CTCGTCGCCCTCGGTAACGACAAGGTCTGGAACTCGGCCAACCCCTTCGATTTCATGGAG 104233 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | || ||||| || || ||| ||||||||||||| |||||| Sbjct 104234 ATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 104277 >seq2 Length=2999908 Score = 93.3 bits (102), Expect = 9e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | || || || |||||||| ||||||||| | | || || ||||| ||||| ||| Sbjct 2063547 ATGTGTCAATATATGGAATTCGTGGCCGACCGCCTCGTCGTCGCGCTTGGATACGACAAA 2063606 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 | ||| || | | |||||| |||| | ||||||||||| || || ||||| || || Sbjct 2063607 ATCTACCACGCGAGGAACCCGTTTGACTGGATGGAGCTCATCTCTCTCCAAGGCAAAGCC 2063666 Query 230590 AACTTCTTCGA 230600 || |||||||| Sbjct 2063667 AATTTCTTCGA 2063677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823756039340