Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 123 3e-23 seq2 91.5 2e-13 >seq7 Length=1807069 Score = 123 bits (136), Expect = 3e-23 Identities = 299/450 (66%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || || ||||| ||| || | |||||||| | ||| || ||||| || || || Sbjct 104004 AGGCACGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTG 103945 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | |||||||| || || ||||| | ||| || || | |||||||| || || ||| Sbjct 103944 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAG 103885 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || || |||||||||| || |||||||| | || || || ||| | | |||| Sbjct 103884 AAGATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCGCTTGTCG 103825 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 ||||| | | |||| ||||| || | ||| ||||| || || || |||||| Sbjct 103824 GAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCC 103765 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 | || | || | |||| || ||||| |||||||| || |||| Sbjct 103764 TGGAACAGGAACTGGCGGCGCGCGTTGTCGCGGATGTACGTGTCGATGAGGAGCGAGTAC 103705 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG-GGCTTCCGC 17319 | || ||||| ||||||||||| ||||| || ||||| || | || ||| || | Sbjct 103704 GTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA-CGTCTTGGCCTCGGA 103646 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 || || || || || |||| || || | || || ||||| ||||||||||| ||| Sbjct 103645 GATCTGGACCTCGGCGCAGAAGCGCTCGACGAGGTTCTCGTTGACGATGCCGTCCGACGC 103586 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAA 17409 |||||| ||||| | | |||| ||||| Sbjct 103585 GGCGAAGAACGCGAGGACGTGCTCGATGAA 103556 >seq2 Length=2999908 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 16940 TGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTG 16999 || || ||||| | ||| ||||| ||||| ||| ||| | ||||| |||| ||| Sbjct 2063400 TGCTTGAGATGGCTGTACAGAAGACAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTG 2063341 Query 17000 ATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATC 17059 || || ||||| || || || | ||| |||| || || ||||| | |||||| || Sbjct 2063340 ATGAGCTCGTTCGAGAAAGTGAGCCCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATT 2063281 Query 17060 GCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGAT 17109 || ||||||||||| || ||||| || || || || | |||||||| || Sbjct 2063280 GCCGCGAACGACCCGGAGAAGAAAATGCCTTCCACACAAGCAAACGCAAT 2063231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545483552240