Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq7 416 3e-111 seq4 140 3e-28 seq3 127 2e-24 seq6 123 3e-23 seq2 95.1 1e-14 >seq7 Length=1807069 Score = 416 bits (460), Expect = 3e-111 Identities = 584/804 (73%), Gaps = 17/804 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||| |||||||||||||||||| ||||||| | |||| Sbjct 103445 ATTTGGCAGATGTACAAGAAGGCCCAGGCGTCGTTCTGGACCGCCGAGGAGATCAACCTC 103504 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||| ||||||||| | |||| |||||||||||| |||||| || Sbjct 103505 GCCCCCGACCTCCACGACTGGGACAACAAGCTGAATGACAACGAGCGCTTCTTCATCGAG 103564 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| |||||||||||||||||||| || |||||||| Sbjct 103565 CACGTCCTCGCGTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGCGC 103624 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | |||| ||| | ||||||| | ||||||||||| |||||| || Sbjct 103625 TTCTGCGCCG-AGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGAT 103683 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCT-CTTCGG 116930 ||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| | || Sbjct 103684 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACAACGC 103743 Query 116931 AGGAGAAGCTCCGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | || | ||| |||| | |||||||| || || || ||| |||| ||||||| Sbjct 103744 --GCGCCGC-CAGTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAGAAGGC 103800 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||| ||||| |||||||||||| ||| || || | || | ||||| ||||| ||| | | Sbjct 103801 CGACTGGGCCCTGCGCTGGATCTCCGACA-AGCGCTCCTCGTTCGGAGAGCGTCTGATCG 103859 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | ||||| |||||||||||| ||||||| |||||| ||||| |||| || ||||||| Sbjct 103860 CGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCTCA 103919 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| |||||||||||||||||||| || ||| ||||||||||||||| | ||||||| Sbjct 103920 AGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCTCGTGACGAGG 103979 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 |||| || |||||| || || | || |||| || | | || || | ||| Sbjct 103980 GTCTCCACACCGACTTCGCGTGCCTCCTCTTCACCCACCTCCGCCGCCGTCCTCACCCGG 104039 Query 117228 -CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | || ||| ||||| ||| || || ||| ||||||||| ||||| ||||| Sbjct 104040 ACACG-ATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACCGAG 104098 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 || ||||| || || | || | || || || | |||| || ||||||||||| Sbjct 104099 GCCCTGCCCGTCTCGCTCATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTT 104157 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 ||||||||| | ||||| ||| || | || |||| || ||| || ||||||| Sbjct 104158 TGTCGCCGACCGCCTGCTCGTCGCCCTCGGTAACGACAAGGTCTGGAACTCGGCCAACCC 104217 Query 117406 GCTGGACTTTATGAACCTCATCTC 117429 | || || ||| | | ||||| Sbjct 104218 CTTCGATTTCATGGAGATGATCTC 104241 >seq4 Length=2739924 Score = 140 bits (154), Expect = 3e-28 Identities = 146/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || |||||||| |||| ||||| || | |||| | | | |||| |||| Sbjct 1418540 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1418482 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||||||| | |||||||| || ||||||| ||| || Sbjct 1418481 GTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1418422 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| |||||||||||||||||||||| | || || Sbjct 1418421 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 1418362 Query 40890 GCATCTAGT 40898 || || || Sbjct 1418361 CCACCTTGT 1418353 >seq3 Length=2964310 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 || |||||||| ||||||||| | || ||||| || | |||| | | |||| |||| Sbjct 1685635 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAACG-TCAA 1685693 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||||||||| | |||||||| || ||||||| ||| || Sbjct 1685694 GTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCCGG 1685753 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| |||||||| ||||||||||||||||||||| | || || Sbjct 1685754 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 1685813 Query 40890 GCATCTAGT 40898 || || || Sbjct 1685814 CCACCTCGT 1685822 >seq6 Length=2071177 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || ||||| | | Sbjct 2048163 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 2048222 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| ||||| || || | ||||| Sbjct 2048223 GACACTATTGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCTCCCGACCA 2048281 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| || |||||| |||||||| Sbjct 2048282 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGGACCCTCTCGGACTACAA 2048341 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 2048342 CATCCAGAAGGAGTCGACCCTCCACCTCGT 2048371 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || || | || Sbjct 2048391 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGTCGTCC 2048450 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| ||||||||||| | |||||| Sbjct 2048451 GACACGATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 2048510 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || |||| ||||| ||| ||||||||| Sbjct 2048511 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACTACAAC 2048570 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || |||||||| || Sbjct 2048571 ATCCAGAAGGAGTCGACTCTGCATCTCGT 2048599 >seq2 Length=2999908 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 117059 GTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGC 117118 || || ||| | ||||| || || ||||| || || |||||||| ||||| || || Sbjct 2063246 GTGGAAGGCATTTTCTTCTCCGGGTCGTTCGCGGCAATCTTTTGGCTGAAGAAGCGTGGT 2063305 Query 117119 CTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGC 117178 ||||||| || || |||||| |||||||||||| | || |||||||||||| | Sbjct 2063306 CTCATGCAGGGGCTCACTTTCTCGAACGAGCTCATCAGTCGAGATGAGGGTCTGCATACC 2063365 Query 117179 GACTTTGCCTGTTTGCTGTTCA 117200 ||||| |||||| | |||| || Sbjct 2063366 GACTTCGCCTGTCTTCTGTACA 2063387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219084075680