Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 297 2e-75 seq7 208 7e-49 seq6 100 3e-16 >seq2 Length=2999908 Score = 297 bits (328), Expect = 2e-75 Identities = 592/865 (68%), Gaps = 14/865 (2%) Strand=Plus/Minus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 |||||||||||||| ||||| ||||| |||||||| || | |||||| | || || Sbjct 498294 GCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGCGAAGAGTACTCAATGATCTCA 498235 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATT-GC 23138 || || || ||| |||| || ||||| | | ||| |||||| || || || || Sbjct 498234 GTGCAGAGGTTGGACGACTTGATGGTGCCGAGGT-GCTGCTGGTTCGACTTGCGGTTTGC 498176 Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198 | | ||||||||||||||| | || || |||||| ||| | |||| ||| || Sbjct 498175 A-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGATGGCGA 498117 Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGG 23257 ||||| |||| || | | ||| || ||| ||| | |||||| | | | Sbjct 498116 ACCACAGCTTCTGGGCCTTGATG-GTCTTGCGACCCTTGCCGGCACGCTCGTAGCTCTCG 498058 Query 23258 TACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGA-CA 23316 |||| | || || || | || | ||| | |||||||| | | || ||| || Sbjct 498057 TACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACT-CAGCGGGGCA 497999 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 |||||| |||| |||| || || || |||| || || || | ||||| || Sbjct 497998 CATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAG 497939 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 ||||||||| || || ||||| || |||||||| || ||| |||||| | || | Sbjct 497938 AGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGGTCGAG 497879 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||||| || | ||| |||||||| ||||| ||||| | ||| || || || || | ||| Sbjct 497878 GAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGGCGCTT 497819 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||| ||||| ||||||||||| || || || ||| | | ||||| || |||| Sbjct 497818 GTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATAGGAACGAT 497759 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 |||||| || |||| ||| || | ||| || || || || | |||||| | Sbjct 497758 ACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGGATGTTGTGGAT 497699 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||||| ||| ||||| ||| ||| || || ||| |||||| || || |||||||| Sbjct 497698 GTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTGAGGGTGTCGTA 497639 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || |||||| |||||| || | ||||| | ||| || || ||||| || || Sbjct 497638 GATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGACATCTGGGC--- 497582 Query 23737 GGGCGTAGCGGCCGA---GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 | | | || | |||| ||| || ||||| ||||||||| ||||| | | |||||| Sbjct 497581 GTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACGCTCCGACAT 497522 Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 || |||||||| |||||| | || |||| || ||||| ||||||| || || || Sbjct 497521 GAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGACGGAAACACG 497462 Query 23854 CATCATCATGTATTGAGGTCTCTCG 23878 ||||| ||||| || || | |||| Sbjct 497461 CATCAGCATGTGCTGGGGGCGCTCG 497437 >seq7 Length=1807069 Score = 208 bits (230), Expect = 7e-49 Identities = 554/834 (66%), Gaps = 23/834 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| | || ||||| ||||||| ||| || | |||| Sbjct 103445 ATTTGGCAGATGTACAAGAAGGCCCAGGCGTCGTTCTGGACCGCCGAGGAGATCAACCTC 103504 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 | || || ||| ||||| | || || || ||| | || || | Sbjct 103505 GCCCCCGACCTCCACGACTGGGACAACAAGCTGAATGACAACGAGCGCTTCTTCATCGAG 103564 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | ||||| |||||||| || || || || || |||||||| | ||||| | Sbjct 103565 CACGTCCTCGCGTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGCGC 103624 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGA-GATGCTTTTACGGATTTCAAGTGGCCAT 57805 || | || || || | | ||||| | || | || ||||| || || | || Sbjct 103625 TTCTGCGCCGAGGTCCAGATCTCCGAGGCCAAGACG-TTCTACGGCTTCCAGATCATGAT 103683 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || || | ||| ||||| |||||||| |||||| | ||||||| Sbjct 103684 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACAACG- 103742 Query 57866 CGAGAAACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 || | | || |||||| | || ||||| || || ||| ||| |||||||| Sbjct 103743 CGCGCCGCC-AGTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCC 103801 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | | ||||| | |||||| || |||||| ||| | || || Sbjct 103802 GACTGGGCCCTGCGCTGGATCTCCGACAAGCGCT----CCTCGTTCGGAGAGCGTCTGAT 103857 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 |||||||||||||||||| || || ||||| |||||| || ||| | || || ||| | Sbjct 103858 CGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCT 103917 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| |||||||| ||||||||||| ||||| ||||||| | || || || ||||| Sbjct 103918 CAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCTCGTGACGA 103977 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCAATAAACCGACGC 58158 ||||||||| || || || |||||||| | | | | ||| | | | | || | Sbjct 103978 GGGTCTCCACACCGACTTCGCGTGCCTCCTCTTCACCCACCTCCGCCGCCGTCCTCACCC 104037 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 || || ||| | || |||| ||||| ||| |||||| | ||||| | |||| Sbjct 104038 GGACACG-ATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACCG 104096 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | ||||| || || | | |||| |||||| | | |||| ||||||| |||| Sbjct 104097 AGGCCCTGCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGT 104156 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 |||| |||||| | || | ||| || | || | ||| | ||| || || Sbjct 104157 TTGTCGCCGACCGCCTGCTCGTCGCCCTCGGTAACGACAAGGTC--TGGAACTCGGCCAA 104214 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || ||||| ||| | |||||||||| |||||||| | ||||| ||||| Sbjct 104215 CCCCTTCGATTTCATGGAGATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGA 104268 >seq6 Length=2071177 Score = 100 bits (110), Expect = 3e-16 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || |||||||| | || ||||| ||||| Sbjct 2048391 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGTCGTCC 2048450 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | || || ||| || | | ||||||||| ||| | ||||||||| Sbjct 2048451 GACACGATCGACAATGTGAA---GAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 2048507 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || ||||| || ||| | || ||| || | || || Sbjct 2048508 CAGCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACTAC 2048567 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || |||||||| ||||| || || Sbjct 2048568 AACATCCAGAAGGAGTCGACTCTGCATCTCGTCCT 2048602 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || |||||| | || || || | || Sbjct 2048163 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 2048222 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| || || ||||||||| || | || ||||||||| Sbjct 2048223 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCTCCCGACCAG 2048282 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| ||| | || || ||| Sbjct 2048283 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGGACCCTCTCGGACTACAAC 2048342 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || || || || Sbjct 2048343 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCT 2048374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766299702560