Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq7 122 1e-22 seq2 113 6e-20 >seq7 Length=1807069 Score = 122 bits (134), Expect = 1e-22 Identities = 169/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||| ||||||||||| | | || | ||||| || |||||||| Sbjct 104001 CACGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGG 103942 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 103941 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAG 103882 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33758 || || || || || || || || || || | |||||| | || || |||| Sbjct 103881 ATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCGCTTGTCGGAG 103822 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 ||||| | ||||| ||||||||||| || | || || || || || ||||| Sbjct 103821 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 >seq2 Length=2999908 Score = 113 bits (124), Expect = 6e-20 Identities = 212/308 (69%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| ||||| ||| ||||||||||| |||| ||| || | ||||| || || ||||| Sbjct 2063377 ACAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAG 2063318 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || |||| || |||||||| || |||||||| || | ||||| || ||||| ||||| Sbjct 2063317 CCCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAA 2063258 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC--TGTCATGT 33758 || ||||| || |||||| ||||| || | | ||| || ||| | |||| Sbjct 2063257 AATGCCTTCCACACAAGCAAACGCAATCAGAC-GTATCCGGAA-GGGCACCTTGTCCGTG 2063200 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 || |||| ||||| || |||||||| | | ||||| || |||| || | || Sbjct 2063199 ATGTACTTCATCGCCCAGTCCGCCTTCTTCTGGATGCAAGGAATGTTTTCCATTCCTTTG 2063140 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 || || ||| || || | |||| || || || || ||||| ||||| || || Sbjct 2063139 AATAGGAAGTCCTTCTCGGCCTTGTCTTGGACGTACGTCTCAATCAACAGACTGTAGGTT 2063080 Query 33879 TCCGAATG 33886 || | ||| Sbjct 2063079 TCGGCATG 2063072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817458291040