Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-25 seq2 109 8e-19 >seq7 Length=1807069 Score = 131 bits (144), Expect = 2e-25 Identities = 171/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| ||||||||||| | | || || |||||||| |||||||| Sbjct 104001 CACGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGG 103942 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || |||||||| || || || || |||||| Sbjct 103941 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAG 103882 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGT 50136 || || || || ||||| || || | || | |||||| | || || |||| Sbjct 103881 ATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCGCTTGTCGGAG 103822 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 ||||| | ||||| ||||||||||| || | || || || || || ||||| Sbjct 103821 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 >seq2 Length=2999908 Score = 109 bits (120), Expect = 8e-19 Identities = 211/308 (69%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| ||||| ||| ||||||||||| |||| ||| || || ||||| || || ||||| Sbjct 2063377 ACAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAG 2063318 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||| || |||||||| || |||||||| || | ||| || ||||| || ||||| Sbjct 2063317 CCCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAA 2063258 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC--TGTCATGT 50136 || ||||| || ||||| |||| || | | ||| || ||| | |||| Sbjct 2063257 AATGCCTTCCACACAAGCAAACGCAATCAGAC-GTATCCGGAA-GGGCACCTTGTCCGTG 2063200 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 || |||| ||||| || |||||||| | | ||||| || |||| || | || Sbjct 2063199 ATGTACTTCATCGCCCAGTCCGCCTTCTTCTGGATGCAAGGAATGTTTTCCATTCCTTTG 2063140 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || ||| || || | |||| || || || || ||||| ||||| || || Sbjct 2063139 AATAGGAAGTCCTTCTCGGCCTTGTCTTGGACGTACGTCTCAATCAACAGACTGTAGGTT 2063080 Query 50257 TCCGAATG 50264 || | ||| Sbjct 2063079 TCGGCATG 2063072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268638389520