Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 123 4e-24 >seq5 Length=2706222 Score = 123 bits (136), Expect = 4e-24 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||||||||| || || ||||| || ||||| ||||| ||||| ||||| Sbjct 267782 CTGCGCGACAACATCCAAGGCATTACGAAGCCTGCGATCCGCCGTCTCGCTCGCCGTGGC 267723 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| |||| || | |||| || |||| || | || | ||||||||| Sbjct 267722 GGTGTGAAGCGTATCTCGGGCCTCATCTACGAGGAGACCCGCGGAGTCCTCAAGATCTTC 267663 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| ||| | || ||| || |||||||| || || ||||| ||| Sbjct 267662 CTGGAGAACGTGATCCGTGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTC 267603 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || || | || | ||||| || | || || || ||||| Sbjct 267602 ACGTCGCTCGACGTTGTCTACGCCCTCAAGCGCCAGGGCCG 267562 Score = 107 bits (118), Expect = 3e-19 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 16466 ATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 || || || || || ||||| || ||||| ||||| || || ||||| || || |||||| Sbjct 1966149 ATACAGGGCATTACGAAGCCTGCAATCCGCCGTCTCGCGCGCCGTGGCGGTGTGAAGCGT 1966090 Query 16526 GTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTT 16585 |||| || | |||| || |||| || | || | ||||||||||| ||| ||| Sbjct 1966089 ATCTCGGGCCTCATCTACGAGGAGACCCGCGGCGTCCTCAAGATCTTCCTGGAGAACGTG 1966030 Query 16586 ATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGAT 16645 |||| || | || || ||||||||||| || || ||||| |||||||| | || Sbjct 1966029 ATCCGCGACTCGGTCACGTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGAC 1965970 Query 16646 ATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||| || | || || || ||||| Sbjct 1965969 GTCGTCTACGCCCTCAAGCGCCAGGGCCG 1965941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075183542474