Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-25 seq2 113 6e-20 >seq7 Length=1807069 Score = 131 bits (144), Expect = 2e-25 Identities = 171/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| ||| ||||||||||| | | || || |||||||| |||||||| Sbjct 104001 CACGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGG 103942 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 103941 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAG 103882 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33480 || || || || || || || || || || | |||||| | || || |||| Sbjct 103881 ATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCGCTTGTCGGAG 103822 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 ||||| | ||||| ||||||||||| || | || || || || || ||||| Sbjct 103821 ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 >seq2 Length=2999908 Score = 113 bits (124), Expect = 6e-20 Identities = 212/308 (69%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| ||||| ||| ||||||||||| |||| ||| || || ||||| || || ||||| Sbjct 2063377 ACAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAG 2063318 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || |||| || |||||||| || |||||||| || | ||||| || || || ||||| Sbjct 2063317 CCCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAA 2063258 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC--TGTCATGT 33480 || ||||| || |||||| ||||| || | | ||| || ||| | |||| Sbjct 2063257 AATGCCTTCCACACAAGCAAACGCAATCAGAC-GTATCCGGAA-GGGCACCTTGTCCGTG 2063200 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 || |||| ||||| || |||||||| | | ||||| || |||| || | || Sbjct 2063199 ATGTACTTCATCGCCCAGTCCGCCTTCTTCTGGATGCAAGGAATGTTTTCCATTCCTTTG 2063140 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 || || ||| || || | |||| || || || || ||||| ||||| || || Sbjct 2063139 AATAGGAAGTCCTTCTCGGCCTTGTCTTGGACGTACGTCTCAATCAACAGACTGTAGGTT 2063080 Query 33601 TCCGAATG 33608 || | ||| Sbjct 2063079 TCGGCATG 2063072 Score = 104 bits (114), Expect = 3e-17 Identities = 429/674 (64%), Gaps = 6/674 (1%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 || || || ||| | || ||||| | | ||| || |||||| || || || ||||| Sbjct 498018 CCGGGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATG 497959 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 ||||| || | ||||| ||||| || || || | || | | ||||| ||||| Sbjct 497958 AAGAGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCG 497899 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| || |||||||| | | || || | |||||| || || | ||| ||| Sbjct 497898 TGGTTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATG 497839 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | ||||| || ||||| || ||||| || | ||| | ||| || | || Sbjct 497838 GCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAG 497779 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 | | | ||| |||| |||||||| || || ||||| || | || || || Sbjct 497778 GCACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCC 497719 Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527 |||| || || || || ||||| || || || ||| | || ||||| ||| Sbjct 497718 TTGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCG 497659 Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63587 || || | ||||| |||||||| || ||| || || ||||| | || || Sbjct 497658 CAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAG 497599 Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647 || ||||| ||| || ||| |||| || || | || || || |||||||| Sbjct 497598 CAAGACGACATCTGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTG 497539 Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCTGAGTCTATATCCCATTG--A 63704 || | || || | || ||||||||||| || | || ||| || | | Sbjct 497538 AAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCT---TCTCGATGTTGTCGCCG 497482 Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764 ||||| || || | |||||||| | ||||||||| || | || |||||||| || Sbjct 497481 TGAATACCGACGGAAACACGCATCAGCATGTGCTGGGGGCGCTCGGCGATCTTGCCGTCG 497422 Query 63765 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63824 || | | |||||| || | || || ||||| || |||||||| | ||||| Sbjct 497421 ATGCGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAACCGAAGTAGTTGTAGGCGAAGTCG 497362 Query 63825 CGTTCGTAAATAAT 63838 || || || || || Sbjct 497361 CGGTCATAGATGAT 497348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947059836880