Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 370 3e-97 >seq2 Length=2999908 Score = 370 bits (410), Expect = 3e-97 Identities = 1070/1631 (66%), Gaps = 28/1631 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 |||||||||||| | || || | | ||| | || |||| | | | |||||||| ||| Sbjct 497537 TTCACGCACGCCTCACCGACGCTCTTCAACTCGGGCACTCCTCACGCCCAGATGTCGTCT 497596 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | |||||||| || |||||||| ||||||| ||||| || |||| Sbjct 497597 TGCTTCCTCGTCGCCATGAAGGAGGACTCCATCGACGGTATCTACGACACCCTCAAGACC 497656 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || | || ||||||| || || || || ||| | |||||||| | || || Sbjct 497657 TGCGCGCAGATCTCCAAGACGGCCGGTGGCATCGGTCTCCACATCCACAACATCCGCGCC 497716 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || | |||||| ||||| || |||||||| || | ||||| ||||| ||| Sbjct 497717 AAGGGCTCGTACATTGCTGGCACCAACGGCTACTCGAACGGTATCGTTCCTATGCTCCGT 497776 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 | | ||| |||||| | ||||||||||||||||| |||||| || || || Sbjct 497777 GCCTACGACGCTACTGCTCGTTACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTC 497836 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || || || || ||||| |||||||| || || || || || || ||||| || ||| Sbjct 497837 GCCATCTACCTTGAGCCCTGGCATGCCGACATCTTCGACTTCCTCGACCTCCGCAAGAAC 497896 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 ||||| ||||| | ||||| ||||| || ||||| || || ||| | || |||| Sbjct 497897 CACGGAAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTACGCTCTCTGGATCTCCGACCTC 497956 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 || |||||||| || ||| | | | ||| | ||| | ||||| || || || Sbjct 497957 TTCATGAAGCGTGTCGAGTCTGACGGTGACTGGACCCTCATGTGCCCCGCTGAGTGCCCC 498016 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAG 364086 || || || || || || || | | || ||||| | || || | Sbjct 498017 GGCCTCTCGGACGTTCACTCCGAGGAGTTCGAGAAGCTGTACGAGAGCTACGAGCGTGCC 498076 Query 364087 GGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 || |||| ||| ||||| || || |||||||| ||||| |||||| | || | ||| Sbjct 498077 GGCAAGGGTCGCAAGACCATCAAGGCCCAGAAGCTGTGGTTCGCCATCCTCGAAGCCCAG 498136 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC-AACCGCAAGTCCAACCA 364205 | ||||| || |||| ||| | ||||| || | ||| ||||||||||| ||||| Sbjct 498137 ACCGAGACCGGTGGCCCCTTCATGCTCTACAAGGACGC-TGCAAACCGCAAGTCGAACCA 498195 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 ||||||||| || || || || | |||||| || || ||||| ||||| ||| | | Sbjct 498196 GCAGCACCTCGGCACCATCAAGTCGTCCAACCTCTGCACTGAGATCATTGAGTACTCTTC 498255 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------ 364319 || |||||| ||||| || |||||||| |||||||| ||||| || || || Sbjct 498256 GCCTGACGAGGTCGCCGTCTGCAACCTTGCCTCGATCGCTCTTCCTGCCTTCGTTGACTT 498315 Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377 |||| | | || | || | || | || | || | ||| | | || | Sbjct 498316 CGAAAACAAG--ACCTACAACTTCAAGAAGCTCCACGAGATCACCAAGGTCGTCACCAGG 498373 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG-AGCGTTCTA 364435 || || ||| |||||||| | || || || || | ||||| || || | | || | Sbjct 498374 AACCTTGACCAGGTTATCACCCGCAACTACTACCCCGTCCCTGAGGCTCGCAAC--TCGA 498431 Query 364436 ATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC 364495 | ||||| || || || | ||||| ||||| ||||| || || ||| ||| ||| | Sbjct 498432 ACATGCGCCACCGTCCCGTCGGTCTCGGTGTCCAGGGTCTTGCCGACACTTTCATGGCTC 498491 Query 364496 TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555 || ||| | || || |||| || |||||| || || ||||||| || || | Sbjct 498492 TCCGCATGCCCTTCGACTCGCGCGAGGCTCGTCAGCTCAACCTCCAGATCTTCGAGACCA 498551 Query 364556 TGTATTTTGCCG-CAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCT 364614 | || ||| | | ||| | | |||||||| |||| || || |||||| || Sbjct 498552 TCTACCATGCTGCCCTTGAGT-CCTCGTGTGAGATGGCGAAGGAGTTCGGCAAGTACCCT 498610 Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 | || ||||| || || |||| ||||| || ||||| || || ||| |||| Sbjct 498611 TCGTACGAGGGTTCGCCCATTTCCCAGGGCAAGATCCAGCCCGACCTTTGGGGTGTCGTT 498670 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 || | | || ||||||||||| ||| || ||||| | |||| ||| |||| Sbjct 498671 CCCACCGACCTCTGGAACTGGGACGAGCTTCGCGCCAACATCGCCCAGCACGGTGTTCGC 498730 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 ||||| ||| | || |||||||| || || ||||| | ||||| || || ||| Sbjct 498731 AACTCGCTCCTCGTCGCTCCCATGCCGACTGCGTCTACCTCGCAGATTCTTGGCTGGAAC 498790 Query 364795 GAGTGCTTCGAACCGTTTACA-AGCAAT-CTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 ||||||||||| || ||||| | || || || || ||||| || || ||||| || | Sbjct 498791 GAGTGCTTCGAGCC--TTACACCTCGATGCTCTACTCTCGCCGTGTCCTGTCCGGTGACT 498848 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | | || || | || || || || | ||| ||| | |||| || Sbjct 498849 TCGCTGTCGTCTGCCCCTGGCTCCTCCGCGACCTGATCAACCTCGGCATTTGGGACGAGG 498908 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972 ||||||||| ||||||||| | || || | ||| |||| || |||| | Sbjct 498909 AGATGAAGAACCTCATCATCGCCTCCGGAGGCTCCATCCAGCACATCCCCAACATTCCCG 498968 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-CATGCGAA--CTCTCATTG 365029 | || | ||| | || ||||| || || ||||| || || || ||| || |||||| Sbjct 498969 ACGACATCAAGGCCATCTACAAGACTGTCTGGGAGATCTCGCA---GAAGGCTGTCATTG 499025 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA 365089 | | || ||||| || || || || || ||| |||||| | ||| | | | Sbjct 499026 ACCTCGCTGCCGACCGTGGCGCGTTCATTGACCAGTCTCAGTCGCTCAACATCCACCTTG 499085 Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 | | || | | | | |||| || || ||||| |||||||| ||||| || || | Sbjct 499086 CGAACCCCTCGTTCTCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGTGGACTCA 499145 Query 365150 AGACAGGTGCC 365160 |||| |||||| Sbjct 499146 AGACTGGTGCC 499156 Score = 118 bits (130), Expect = 3e-21 Identities = 161/221 (73%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 22436 AGAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGA-A 22491 |||| ||||| || |||||| |||| | || | |||| | | | ||| |||| | Sbjct 2063169 AGAAGAAGGCGGACTGGGCGATGAAGTACATCACGGACAAGGTGC---CCTTC-CGGATA 2063224 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 ||||| ||||| |||||| || |||||||||||||| || || | || |||||| Sbjct 2063225 CGTCTGATTGCGTTTGCTTGTGTGGAAGGCATTTTCTTCTCCGGGTCGTTCGCGGCAATC 2063284 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 |||||||| || || |||| | |||| ||| || || || || || ||| | || || Sbjct 2063285 TTTTGGCTGAAGAAGCGTGGTCTCATGCAGGGGCTCACTTTCTCGAACGAGCTCATCAGT 2063344 Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652 |||||||||||||| |||||||| || || ||| | || || Sbjct 2063345 CGAGATGAGGGTCTGCATACCGACTTCGCCTGTCTTCTGTA 2063385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353299414076