Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 134 1e-26 seq4 129 6e-25 seq7 125 7e-24 seq3 120 3e-22 >seq6 Length=2071177 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||| || Sbjct 2048389 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2048330 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 2048329 AGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 2048270 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | ||| || | ||||||| Sbjct 2048269 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACC 2048210 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 2048209 TCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||||||||||| || |||||||| || Sbjct 2048617 CCTCCACGGAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAG 2048558 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || || |||| | ||||||||||| || ||| Sbjct 2048557 AGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2048498 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||| | Sbjct 2048497 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACC 2048438 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 2048437 TCCAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 >seq4 Length=2739924 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 1418335 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1418394 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 1418395 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 1418454 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | |||||||| Sbjct 1418455 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 1418514 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 |||| || | ||| |||||||| || Sbjct 1418515 TCGAGAGTGATGGTCTTACCGGTGAG 1418540 >seq7 Length=1807069 Score = 125 bits (138), Expect = 7e-24 Identities = 264/391 (68%), Gaps = 7/391 (2%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT--TTCGCCGAGC 46156 ||||| |||||||||| || |||||| | || | ||| || |||| |||| Sbjct 103793 AAGAAGGCCGACTGGGCCCTGCGCTGGATCTCCGACA--AGCGCTCCTCGTTCGGAGAGC 103850 Query 46157 GTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCT 46216 || || | || || || || |||||| |||| || || ||| || || |||||| Sbjct 103851 GTCTGATCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCT 103910 Query 46217 TTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | | |||| | ||| ||||||||||||| ||||| ||||||||| || || | Sbjct 103911 TCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCTC 103970 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| || || || ||||| ||||| ||| || ||| | | | | | | Sbjct 103971 GTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTCT---TCACCCACCTCCGCCGCC 104027 Query 46337 AGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGT 46396 | | || ||||| | | || |||||||||| || || ||| |||||| Sbjct 104028 GTCCTCACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGT 104087 Query 46397 TTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACT 46456 | | || | || ||||||| | || | ||||||||||| || |||||| | | Sbjct 104088 TCCTGACCGAGGCCCTGCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGT 104147 Query 46457 ACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 ||||||||||||| || ||||| |||||||| Sbjct 104148 ACATCGAGTTTGTCGCCGACCGCCTGCTCGT 104178 >seq3 Length=2964310 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | |||||||||||| || |||||||| || Sbjct 1685840 CCACCACGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1685781 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| |||||| Sbjct 1685780 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1685721 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 1685720 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 1685661 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 || | ||| | ||| || || || || Sbjct 1685660 TCAAGGGTGATGGTCTTGCCCGTCAG 1685635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012693797120