Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 114 3e-20 seq7 95.1 2e-14 seq3 91.5 3e-13 >seq6 Length=2071177 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||| || |||| ||||| |||||||||||||| || || ||||| || ||||||| ||| Sbjct 627075 GGTATCGTTGGTCCCAACGGTGCGGGTAAGTCGACTCTCATCAAGCTCATGACTGGAGAG 627134 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 ||| | |||||| |||| ||||| || | || | | ||||||||| Sbjct 627135 ACCGTTCCTCAGGAGGGGACCGTGCACAAGCACCCTGCTCTCCGTGTCGGTTACGTCGCC 627194 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||| ||| | | |||||||||| |||| | ||| ||||| ||| Sbjct 627195 CAGCACGCGTTCCACCATATCAACGAGCACCTGGACAAGACTGCGGTCCAGTACATCCAG 627254 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 627255 TGGCGTTA 627262 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || || |||||||||||||||||||| | || | |||| || || | || Sbjct 626607 TCGCTCTCTGGTGGTTGGAAGATGAAGCTCGAGCTTGCCCGCGGAATGCTCGTCAACCCC 626666 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || || || |||||||| ||||||||| ||||| | ||| |||||||| Sbjct 626667 GACATTCTCCTTCTCGATGAGCCTACCAACCACTTGGACGTGCAGACCGTTGCCTGGCTC 626726 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 | ||||| | || || || | ||| | | || ||||| ||||||||||| Sbjct 626727 GAAGAGTACCTGAACAACCTCCAGGGCATCACTTGCATGATCGTCTCGCACGACTCTGGA 626786 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCT 279934 ||||| || ||| ||| | | |||||| ||||| ||||| || |||||| Sbjct 626787 TTCCTCGACAACGTTTGCACCGACATCATCCACTACGAGCAGAA---GAAGCT 626836 >seq7 Length=1807069 Score = 95.1 bits (104), Expect = 2e-14 Identities = 277/416 (67%), Gaps = 8/416 (2%) Strand=Plus/Minus Query 251549 CAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGT 251608 |||| ||||| |||||||| || | |||||||| ||| ||||| | ||||||||| | Sbjct 104282 CAGACACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAAT 104223 Query 251609 CGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTG 251668 |||||||||| | | || | |||| | || || || |||| | |||||| | Sbjct 104222 CGAAGGGGTTGGCCGAGTTCCAGACCTTGTCGTTACCGAGGGCGACGAGCAGGCGGTCGG 104163 Query 251669 CCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGA 251727 | |||||||| | ||||| | ||| || | | ||||||||| || | ||| | || Sbjct 104162 CGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGA-GCGAGACGGGC 104104 Query 251728 ATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC 251787 | ||||| | ||| |||| ||| | || ||||||| | || || | | Sbjct 104103 AGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATC 104044 Query 251788 TGTGCCAGAGACAGCTTGTTCTC-CAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGT 251845 ||| | | | || | | || | | | | |||| || ||| || | | || Sbjct 104043 -GTGTCCGGGTGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCACGCGAAGTCGGT-GT 103986 Query 251846 GCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCAC 251905 | ||||||||||| ||| ||||| ||||||||| | ||||| ||||| | || | Sbjct 103985 GGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGC 103926 Query 251906 GGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 | ||| ||||||||||||| | ||| || || || ||||| | | |||||||| Sbjct 103925 GCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCCCGAGAAGAAGATGCCCTCGAC 103871 >seq3 Length=2964310 Score = 91.5 bits (100), Expect = 3e-13 Identities = 132/184 (72%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 280177 TTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGG 280236 |||| ||||| || | || ||||| || || |||| ||||||| ||||||||| || Sbjct 465434 TTGGTCCCAACGGATCTGGAAAGTCGACTCTTGTCAAGCTCCTGACCGGCGAGACCGAGC 465375 Query 280237 CCACTGAGGG--GT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 ||| | || || |||| |||||||| |||||| | || | ||||| || |||| Sbjct 465374 CCAACGTCGGCGGTACCGTATGGAAGCACCCCAACCTCGTCATCGGCTACGTTGCCCAGC 465315 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| ||||||||||| || | ||||| ||| ||| || | | ||||| | |||| Sbjct 465314 ACGCGTTCCACCACATTGACCAGCACCTCGACTCGACCCCGCTCGAGTACATGCTCTGGC 465255 Query 280354 GCTA 280357 | || Sbjct 465254 GTTA 465251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836562955138