Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7 172 1e-37 seq6 158 2e-33 seq4 140 6e-28 seq3 140 6e-28 seq2 98.7 2e-15 >seq7 Length=1807069 Score = 172 bits (190), Expect = 1e-37 Identities = 571/870 (66%), Gaps = 25/870 (3%) Strand=Plus/Minus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 ||||||||| ||| |||| | || || || |||||||||||||| |||||||| | Sbjct 104303 TGACGCCCGACTTGGAGTACGCAGACACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCA 104244 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054 | || || | ||||||||| || |||||||| | | | ||| || |||| || ||| Sbjct 104243 GCGAGATCATCTCCATGAAATCGAAGGGGTTGGCCGAGTTCCAGAC--CTTGTCGTTACC 104186 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || || |||||||||||||||| ||| || | | ||| Sbjct 104185 GAGGGCGACGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTT 104126 Query 10115 CATGCCAATCATGCG-GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| || | ||| | ||| | ||| ||| | ||| |||| ||| | ||| | Sbjct 104125 CATGCCGATGA-GCGAGACGGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGG 104067 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTC-GAGCTTCGAATAC 10232 | |||| || ||| | || | | ||| ||| || | | ||| | | | Sbjct 104066 CCTCCTTGATGATCTTGTTGATCGTGTC-CGGGTGAGGACGGCGGCGGAGGTGGGTGAAG 104008 Query 10233 AGGA-GCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 |||| || | | || | | |||||| |||||||| || ||||| ||||||||| || Sbjct 104007 AGGAGGCACGCGAAGTCGGT-GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAA 103949 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGG 10350 || ||||||||||| || || || |||||||| |||| ||| |||||| || | Sbjct 103948 CGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCCCG 103890 Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGA---AGGAGCG 10405 ||| |||||| ||||| ||| | | |||| || |||||| ||| ||||||| Sbjct 103889 AGA--AGAAGATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCG 103832 Query 10406 GTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTC 10465 | | || | | | |||||| | |||||||| | | ||||| || || Sbjct 103831 CTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTC 103772 Query 10466 GATAGCCTCGAA---GAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAG 10522 ||| |||| ||| || || | ||| || | ||| | || | | || | ||| Sbjct 103771 GATGGCCTGGAACAGGAACTGGCGGCGCGCGTTGTCG-CGGATGTACGTG--TCGATGAG 103715 Query 10523 CAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACG 10582 || ||||| ||| ||||| | |||| | |||| | |||||||| | Sbjct 103714 GAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAACGTCTT 103655 Query 10583 TGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCC 10642 ||| || | | ||| || || ||| | | |||||||| | || ||||| Sbjct 103654 GGCCTCGGAGATCTGGACCTCGGCGCAGAAGCGCTCGACGAGGTTCTCGTTGACGATGCC 103595 Query 10643 ATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAG 10702 || | || ||||| |||||| ||||| ||||||| |||||| | || ||||| Sbjct 103594 GTCCGACGCGGCGAAGAACGCGAGGACGTGCTCGATGAAGAAGCGCTCGTTGTCATTCAG 103535 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 || | |||||| | || || ||| | || |||||| |||||||||| | Sbjct 103534 CTTGTTGTCCCAGTCGTGGAGGTCGGGGGCGAGGTTGATCTCCTCGGCGGTCCAGAACGA 103475 Query 10763 GGCAACGGCCTTCTTGTACATCTGGAAAAT 10792 || |||||||||||||||||| |||| Sbjct 103474 CGCCTGGGCCTTCTTGTACATCTGCCAAAT 103445 >seq6 Length=2071177 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || || ||| Sbjct 2048389 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2048330 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| |||||||| ||||| | || |||||||| ||| Sbjct 2048329 AGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 2048270 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| || || ||||| | || || || Sbjct 2048269 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACC 2048210 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || || ||||||||||| |||||||| Sbjct 2048209 TCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || || ||||| || |||||||| || || ||| Sbjct 2048617 CCTCCACGGAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAG 2048558 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || || | || |||||||| || Sbjct 2048557 AGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 2048498 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||| || ||||| ||||| | || || || Sbjct 2048497 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACC 2048438 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || |||||||||||||| ||||| |||||||| Sbjct 2048437 TCCAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 131 bits (144), Expect = 3e-25 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || ||||| || | ||||| || | |||||| |||||||| ||||| | || ||| Sbjct 2048061 TAGTCAGAGAGCGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 2048002 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 ||||| ||||| || |||||||| |||||||| | ||| || ||||||||||| | | Sbjct 2048001 TCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCAGAT 2047942 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 || || || || | ||||||||| || || |||||||||||| Sbjct 2047941 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 2047900 >seq4 Length=2739924 Score = 140 bits (154), Expect = 6e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || |||||| Sbjct 1418335 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1418394 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || |||||||| || Sbjct 1418395 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 1418454 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 1418455 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 1418514 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || | |||||||| || || |||||| Sbjct 1418515 TCGAGAGTGATGGTCTTACCGGTGAGG 1418541 >seq3 Length=2964310 Score = 140 bits (154), Expect = 6e-28 Identities = 673/1052 (64%), Gaps = 45/1052 (4%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||||| | |||||| ||| ||||| | ||||| |||||||| Sbjct 465251 TAACGCCAGAGCATGTACTCGAGCGGGGTCGAGTCGAGGTGCTGGTCAATGTGGTGGAAC 465310 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC-CCGAG- 225095 || |||||||| ||||| | ||| | |||||| |||||||| || | || |||| Sbjct 465311 GCGTGCTGGGCAACGTAGCCGATGACGAGGTTGGGGTGCTTCCATACGGTACCGCCGACG 465370 Query 225096 -TCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154 | || | | ||||||||| |||| ||||| || || | ||| || | || ||||| Sbjct 465371 TTGGGCTCGGTCTCGCCGGTCAGGAGCTTGACAAGAGTCGACTTTCCAGATCCGTTGGGA 465430 Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTG--CTGAAGATCT 225212 |||| | | | | || || || | | || ||| ||| | |||| | | | | | Sbjct 465431 CCAAGAATGGCGACACGCGAGGAGAGCGAGACTTGCAGGTTGATGTTGTACAGCTGCTGT 465490 Query 225213 CAGG----GCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCC 225268 | || ||| | |||| || | ||| | |||| ||| | || | ||| Sbjct 465491 CTGGCGGAGCCGG---GGTACTGGAACGAGACGTCGCGCATCTTGAGGAGCGACTTCTCC 465547 Query 225269 TTGGAAGTAATACCCTCCAGGA-ACCCGGGCTCGGGGAACTCCCACTTG--GTCACCG-C 225324 |||| | | ||| || |||| | |||| || || | || ||||| ||| || | Sbjct 465548 TTGGTCTTGACACCGTCAAGGAGAGGCGGG-TCCGGCAGCTTGAACTTGTAGTCCTCGGC 465606 Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTT 225384 | | ||| || |||| || |||||||| | | | || || | ||||| Sbjct 465607 GGTGTCGAGGGCGAAGTACGAGCGGGCCTCGGGGACCATGTCAACAAACTTGGTGAGGTT 465666 Query 225385 TCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC 225444 ||| ||| | ||||||||| ||| || || | || | || | ||| Sbjct 465667 GCCGGGGTAACGCTTGAGCTTGAAGTTGTTGAGGTGGAGCAC----GTCGGTGATGGTGC 465722 Query 225445 G-TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503 | | |||||| | |||||||| || || ||||| |||| | | || || ||| Sbjct 465723 GGTTCAGGAAGTCCGAGTCGTGCGAGACCATGATCGACGTGCAGGTGGTAAGCGAGGTGA 465782 Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563 ||| || ||||| | | |||| ||||| | |||||| || || ||||| || | Sbjct 465783 GGTAGTCAATAAGCCAGGTGATGTTGACAACGTCAAGGTGGTTGGTGGGCTCGTCGAGCA 465842 Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623 | || ||||| || | | ||| ||||| |||| |||| |||||||| |||||||| | Sbjct 465843 GAAGAATGTCGGCCTTGAAGAGCATGGCACGCGCAAGAGCGAGCTTCATCTTCCAGCCAC 465902 Query 225624 CGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCG 225683 ||||||| |||||||| || | ||||| | |||| |||||| | | ||||| Sbjct 465903 CGGACAGCGAGCCGATCGAGTCCTTCTGCTTCTCGGCGTCGAAGCCGACCGACTCGAGCG 465962 Query 225684 T---CTGGATAATG------CGCTCGG----GAGAGCTGCGAGCGGCA-ACGTTGGGGTC 225729 | || ||| | ||||||| | | | || | ||| ||| | | || Sbjct 465963 TGGTCTTGATCTCGGCCTCACGCTCGGCGTCGGGGACGCCGGGGAGCAGACGCTTG--TC 466020 Query 225730 GGACGAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCAC 225789 || || | || | | || ||| | | || ||||||||||||| | || Sbjct 466021 AGAGACGACCCAGTCGAAGATGGAGATGGTCTCCTCGGAGCCGTCAATGTCGTGCTGGAC 466080 Query 225790 GTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGC 225849 || | || |||| ||| || | |||||||||||||| | |||| || |||| || Sbjct 466081 ATAGAAGGTGCGGACCTGCGAGGGGTCGGGGAAGCCCTCGACCTGGTTGTTGACAATGGC 466140 Query 225850 ACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCG 225909 | || || |||||| | |||||| | |||| ||| ||||| | | || || Sbjct 466141 GTTCATGAGCGTCGACTTGCCGGTACCGTTGCGGCCGAGGAGACCGTAGCGGTGGCCACG 466200 Query 225910 CTTGATGTTGAGG--CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAAC 225967 ||| | |||| ||||| || || || |||||| |||| ||||||||| ||| Sbjct 466201 CTTCAGACGGAGGTTGGCGTG--GTGGAGAAGAATCTTGGCACCGTAGGCAAGGTTGAAT 466258 Query 225968 TCG-CAA--TCGCACAGGTCCTCACCCTCCTC 225996 | | ||| | ||||||||||| |||||||| Sbjct 466259 TGGTCAATGTTACACAGGTCCTCGCCCTCCTC 466290 >seq2 Length=2999908 Score = 98.7 bits (108), Expect = 2e-15 Identities = 418/648 (65%), Gaps = 27/648 (4%) Strand=Plus/Minus Query 30920 CTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGTCTTCATAGA 30979 ||| | |||||||| |||| || ||||| || || ||||||||||| | |||| || Sbjct 499066 CTGAGACTGGTCAATGAACGCGCCACGGTCGGCAGCGAGGTCAATGACAGCCTTCTGCGA 499007 Query 30980 CAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGCTCAGGGTGGATGCCAATGACACGTTG 31039 | |||||| | ||||||||||| ||||||| || | | ||| || | || Sbjct 499006 GATCTCCCAGACAGTCTTGTAGATGGCCTTGATGTCGTCGGGAATGTTGGGGATGTGCTG 498947 Query 31040 GATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCACGTGCCACGAGC 31099 |||||| || ||| ||| || || |||||||||| ||||| ||| |||| | Sbjct 498946 GATGGAGCCTCCGGAGGCGATGATGAGGTTCTTCATCTCCTCGTCCCAAATGCCGAGGTT 498887 Query 31100 GATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGCAAGGGTCCGGCG 31159 ||| |||||||| | ||| || | ||| |||| ||| || || | ||| ||||| Sbjct 498886 GATCAGGTCGCGGAGGAGCCAGGGGCAGACGACAGCGAAGTCACCGGACAGGACACGGCG 498827 Query 31160 GCTGTACAGATTAGAAGTGATCGGCTCCATAGCCTCTACGGACCCGC--AG-ATTTGCGC 31216 ||| || | || ||| ||||| | || | || || || || || || |||| Sbjct 498826 AGAGTAGAGCATCGAGGTGTAAGGCTCGA-AG-CACT-CGTTCCAGCCAAGAATCTGCGA 498770 Query 31217 GGTGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCTTCTTGACGCG 31276 ||| || || || ||||| | ||| | ||||| || | ||||| | || | ||| Sbjct 498769 GGTAGACGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTGG--GCG 498712 Query 31277 CTCTT----CGAGGGTC-TTCCAGT--CA-AGGCGAGTTACCGGCTCGGTTCCCCAGAGG 31328 | || ||| | || | ||||| || ||| || || || ||||| ||| Sbjct 498711 ATGTTGGCGCGAAGCTCGTCCCAGTTCCAGAGGTCGGT---GGGAACGACACCCCAAAGG 498655 Query 31329 TGATACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGATGGGGA----CC 31384 | ||| ||| || | || ||| || ||||| ||| || ||| | || Sbjct 498654 TCGGGCTGGATCTTGCCCTGGGAAATGGGCGAACCCTC----GTACGAAGGGTACTTGCC 498599 Query 31385 GTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCAAAGAT 31444 | ||| | ||| | || || |||| ||| | || ||| ||| || |||| ||||| Sbjct 498598 GAACTCCTTCGCCATCTCACACGAGGACTCAAGGGCAGCATGGTAGATGGTCTCGAAGAT 498539 Query 31445 TTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACAC 31504 | ||||||| | ||| || ||||| || |||||||| || | ||| Sbjct 498538 CTGGAGGTTGAGCTGACGAGCCTCGCGCGAGTCGAAGGGCATGCGGAGAGCCATGAAAGT 498479 Query 31505 GTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTT 31552 ||| ||||||||||||||| | || | || || |||||||||| Sbjct 498478 GTCGGCAAGACCCTGGACACCGAGACCGACGGGACGGTGGCGCATGTT 498431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622192634960