Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 452 7e-122 seq7 387 3e-102 >seq2 Length=2999908 Score = 452 bits (500), Expect = 7e-122 Identities = 1233/1874 (66%), Gaps = 57/1874 (3%) Strand=Plus/Minus Query 243776 AGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGC 243835 |||||||| || ||||||||||||| |||| ||| || |||||| | ||| ||| Sbjct 499164 AGGTAGTAGGCACCAGTCTTGAGTCCACGCTTCCAGCCGTAGAAGTGCATCGACGTGAGC 499105 Query 243836 TTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGG 243895 | | | | ||| |||| ||||| || || |||||| ||||| |||| Sbjct 499104 TGCGAGAAC--GAG----GGGT-----TCGCA-AGGTGGATGTTGAGCGACTGAGACTGG 499057 Query 243896 TCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATA 243954 || | ||| | |||| || || || || | | |||| ||||||| || ||||| | Sbjct 499056 TCAATGAACG-CGCCACGGTCGGCAGCGAGGTCAATGACAGCCTTCTGCGAGATCTCCCA 498998 Query 243955 CGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCC 244014 | ||||||||||||| ||||| || ||||| | ||||| ||| | ||||| Sbjct 498997 GACAGTCTTGTAGATGGCCTTGATGTCGTCGGGAATGTTGGGGATGTGCTGGATGGAGCC 498938 Query 244015 CTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGC 244074 | | |||||| || | ||| | |||| ||| | ||| | | ||| Sbjct 498937 TCCGGAGGCGATGATGAGGTTCTTCATCTCCTCGTCCCAAATGCCGAGGTTGATCAGG-- 498880 Query 244075 CTCGACCAGGTGCCTGTTC---ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTA 244131 ||| ||| ||| | || || || || || ||||| || ||||| ||| Sbjct 498879 -TCGCGGAGGAGCCAGGGGCAGACGACAGCGAAGTCACCGGACAGGACACGGCGAGAGTA 498821 Query 244132 GAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGC 244191 ||| | | || ||||||| || ||| | ||| || ||||||| || ||| Sbjct 498820 GAGCATCGAGGTGTAAGGCTCGAAGCACTCGTTCCAGCCAAGAATCTGCGAGGTAGACGC 498761 Query 244192 AGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCT 244251 |||||||||||| | || || || ||| | || |||||| |||| | | Sbjct 498760 AGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTGGGCGATGTTGGCGCG 498701 Query 244252 GAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAA 244311 ||||||| ||||| ||| |||||| | | || ||||| | ||| Sbjct 498700 AAGCTCGTCCCAGTTCCA---------GAGGTCGGTGGGAACGACACCCCAAAGGTCGGG 498650 Query 244312 CTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG 244371 ||| | | |||| | | ||| |||||||| | ||||| ||| || Sbjct 498649 CTGGATCTTGCCCTGGGAAATGGGCGAACCCTCGTACGAAGGGTACTTGCCGAACTCCTT 498590 Query 244372 GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431 |||| || ||| || ||||| || | ||||||||||||||||||| ||| Sbjct 498589 CGCCATCTCACACGAGGACTCAAGGGCAGCATGGTAGATGGTCTCGAAGATCTGGAGGTT 498530 Query 244432 CATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAG 244491 | | || |||| || || |||||| |||| | |||||| |||||| || Sbjct 498529 GAGCTGACGAGCCTCGCGCGAGTCGAAGGGCATGCGGAGAGCCATGAAAGTGTCGGCAAG 498470 Query 244492 TCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCAC 244551 ||||| || |||| |||| ||| | ||| ||| |||| ||| || || || || Sbjct 498469 ACCCTGGACACCGAGACCGACGGGACGGTGGCGCATGTTCGAGTTGCGAGCCTCAGGGAC 498410 Query 244552 GGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTC 244611 |||||| |||||| | ||| |||| || ||||| | ||||| | | || || Sbjct 498409 GGGGTAGTAGTTGCGGGTGATAACCTGGTCAAGGTTCCTGGTGACGACCTTGGTGATCTC 498350 Query 244612 GGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTC 244671 | ||| || |||| ||| || | | ||| | || || || | Sbjct 498349 GTGGAGCTTCTTGAAGTTGTA------GGTCTTGTTTTCGAAG----TCA--ACGAAGGC 498302 Query 244672 GTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGAC 244731 || |||| ||| |||||||||||||| ||||| || | | ||||| | Sbjct 498301 AGGAAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGCGAAGAGTACTCAAT 498242 Query 244732 AATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGC 244791 ||||| ||||||||||| ||||||||||||| |||||||| || || |||||| Sbjct 498241 GATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCG 498182 Query 244792 GTT-GCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA 244850 ||| |||| |||||||||||||||||||||| || ||||||||| |||||| |||||| Sbjct 498181 GTTTGCAG-CGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGA 498123 Query 244851 CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGC 244910 | | ||| || | | ||||||| ||| ||||| ||||||| | |||||||| Sbjct 498122 TGGCGAACCACAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTGCCGGCACGCTCGTAGC 498063 Query 244911 GGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCG 244970 |||||| ||||||||| | || || |||||||||||| || | Sbjct 498062 TCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACTCAGCGG 498003 Query 244971 GGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCC 245030 |||||||||| |||| || ||| | || ||| | || |||||||||||||| ||||| Sbjct 498002 GGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAGATCC 497943 Query 245031 AGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 |||| || | ||||||||| | || | ||| ||| || |||||| | || | Sbjct 497942 AGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGGT 497883 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 | | ||||| |||| |||| | ||||||||||| | ||||| |||| ||| || || | Sbjct 497882 CGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGGC 497823 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTA 245206 |||||||||| |||||||| | | | ||||| |||| | || || || || Sbjct 497822 GCTTGTTGCCACCCTGGTCGA----CGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATA 497767 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || || ||||| |||| |||||||||||| ||||| | ||||||| | | || | Sbjct 497766 GGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGGATG 497707 Query 245267 TTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATG 245326 ||| |||| | || | || ||||| ||||||||| | |||||| |||||| | Sbjct 497706 TTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTGAGG 497647 Query 245327 GTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGC 245386 ||||| || || || ||| |||| ||||||| || || ||||| || |||| | Sbjct 497646 GTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGACATC 497587 Query 245387 TGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC 245446 |||| | || ||| ||||||||| || || || |||||| || ||||| || | Sbjct 497586 TGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACGCTCC 497527 Query 245447 GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGC 245505 || | || |||||||| || | ||||||||||||||||| || | | || Sbjct 497526 GACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGACGGAA 497467 Query 245506 GCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATG 245563 || | ||| || |||||||||| |||| | | | | ||| | ||| | | Sbjct 497466 ACA-CGCATCAGCATGTGCTGGGGGCGCTCG--GCGATCTTGCCGTCGATGCGGAGGAGG 497410 Query 245564 TAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTG 245623 |||||||||||||| |||||||| || ||||| |||| | |||||| || | || Sbjct 497409 TAGGAGCGCTCGAGGGTCTTGAAACCGAAGTAGTTGTAGGCGAAGTCGCGGTCATAGATG 497350 Query 245624 ACGGCTGCGTCGAG 245637 | ||| |||||||| Sbjct 497349 ATGGCAGCGTCGAG 497336 Score = 161 bits (178), Expect = 2e-34 Identities = 269/378 (71%), Gaps = 12/378 (3%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| | ||||| | || || |||||| |||||||||||||||||||| | || Sbjct 2063135 CTATTCAAAGGAATGGAAAACATTCCTTGCATCCAGAAGAAGGCGGACTGGGCGATGAAG 2063194 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG-CTGGTAGCCTTTACCGCCGTCGA 42727 | ||| | | | | || | ||| | || | | ||| | || ||| | || || Sbjct 2063195 TACATCACG-GACAAGGTGC--CCTTCCG-GATACGTCTGATTGCGTTTGCTTGTGTGGA 2063250 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGA 42786 ||||| |||||||| || | ||||| | ||||| ||||| ||| || ||| || | Sbjct 2063251 AGGCATTTTCTTCTCCGGGTCGTTCGCGGCAATCTTTTGGCTGAAGAAGCGTGGTCTC-A 2063309 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 ||| || ||||| ||||||||||| |||||||| | || ||||| ||||||| |||| Sbjct 2063310 TGCAGGGGCTCACTTTCTCGAACGAGCTCATCAGTCGAGATGAGGGTCTGCATACCGACT 2063369 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 | ||||| || |||| | ||||| |||| ||||||| |||| | ||| || | | Sbjct 2063370 TCGCCTGTCTTCTGTAC---AGCCATCTCAAGCACAAGTGCTCGCAAGAGGAAGTTCACG 2063426 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 |||| ||| ||| | | || || ||||||||||| | ||| | ||||| |||||| Sbjct 2063427 CCATTGTCAAAGAGTCGCTCGATATTGAGAAGGAGTTTTTGACGGACGCGCTG-CCGTGT 2063485 Query 42967 -CCCTGGTCGGCATGAAC 42983 | ||| ||||||| ||| Sbjct 2063486 GCTCTGATCGGCATCAAC 2063503 >seq7 Length=1807069 Score = 387 bits (428), Expect = 3e-102 Identities = 596/833 (72%), Gaps = 18/833 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| ||| || |||||||||||||||||| |||| ||| ||| Sbjct 103454 ATGTACAAGAAGGCCCAGGCGTCGTTCTGGACCGCCGAGGAGATCAACCTCGCCCCCGAC 103513 Query 42369 ACGGCCGGCTGGGAGT-CA--CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425 || |||||| || ||| ||| ||||| || ||| || | || | || Sbjct 103514 CTCCACGACTGGGACAACAAGCTGAATGACAACGAGCGCTTCTTCATCGAGCACGTCCTC 103573 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || ||||||||||| || |||||||| ||||| |||||||| | | | ||| Sbjct 103574 GCGTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGCGCTTCTGCGCC 103633 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 ||||| ||| || ||||| ||||||||||||||||| || |||||| | Sbjct 103634 GAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATGGAGAACATC 103693 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC-GTAA 42604 ||||| ||| |||| | || || |||||||||||| || || || || | | Sbjct 103694 CACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACAACG-CGCGCCGCCA 103752 Query 42605 CGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 |||||| ||||||| || || || |||||||||||||||||||| |||||||| || Sbjct 103753 GTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCT 103812 Query 42665 CAACTGGATCGA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723 ||||||| || || | | ||||||| ||| | ||| | || || |||||| Sbjct 103813 GCGCTGGATCTCCGACAAGCG-CTCCTCGTTCGGAGAGCGTCTGATCGCGTTCGCCGCCG 103871 Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTG 42782 ||||||||||||||||||||||| | ||||| |||||||||||||||||| || || Sbjct 103872 TCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCTCAAGAAGCGCGGCC 103931 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 || |||||||| ||||| ||||| ||||| |||||| | |||||||| || || | Sbjct 103932 TC-ATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACC 103990 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGT 42901 ||||| || |||||||| ||| | ||||||| | | | | |||| ||| | | Sbjct 103991 GACTTCGCGTGCCTCCTCTTC---ACCCACCTCCGCCGC-CGTCCTCACCCGGACACGAT 104046 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | ||||||| ||||||||| |||||||| |||||||||| || || | ||||| Sbjct 104047 CAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACCGAGGCCCTGCC 104106 Query 42962 CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 ||| || || ||||||||||| | | ||||||||| |||||||| ||| |||||||| Sbjct 104107 CGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGA 104166 Query 43022 CCATCTCCT-GT-GCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 || || || || ||| | ||| | | ||| ||| || | ||||||||| Sbjct 104167 CCGCCTGCTCGTCGCC--CTCGGTAACGACAAGGTCTGGAACTCGGCCAACCCCTTCGAT 104224 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132 || ||||||| |||||| || |||||||| ||||||| |||||| ||| || Sbjct 104225 TTCATGGAGATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 104277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338987523680