Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 134 3e-26 >seq6 Length=2071177 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || ||||| | || |||||||| | || || || ||||| || ||||| Sbjct 2048620 TGACCTCCACGGAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCT 2048561 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||||||||||||||| || | || ||||| || |||||||| ||||| || Sbjct 2048560 GAGAGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGC 2048501 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || |||||||| || ||| ||||| || || || | ||| ||| || Sbjct 2048500 GGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATCGTGTCGGACGACTC 2048442 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || ||||| ||||| |||||||| Sbjct 2048441 AACCTCCAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | || || || ||||| || ||||| | | Sbjct 2048389 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2048330 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || || |||||||| || ||||| || || Sbjct 2048329 AGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 2048270 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || |||| || || || || Sbjct 2048269 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACC 2048210 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 2048209 TCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654127942204