Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 172 7e-38 seq7 123 3e-23 >seq2 Length=2999908 Score = 172 bits (190), Expect = 7e-38 Identities = 395/590 (67%), Gaps = 15/590 (3%) Strand=Plus/Minus Query 114737 TCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACA 114796 || ||||| || || || | | ||||| | ||| | ||| | ||| | ||| ||| Sbjct 498027 TCCGAGAGGCCGGGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACA 497968 Query 114797 CGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCT 114856 ||||||||||||||||| | |||||||||||| ||||||| || || ||| | || Sbjct 497967 CGCTTCATGAAGAGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCC 497908 Query 114857 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 114916 || | || || || || | || | ||||| | ||| || || ||||| || || Sbjct 497907 TCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCA 497848 Query 114917 AGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCT 114970 ||||| | |||| | || | | || ||| |||||| || || | || Sbjct 497847 AGGTAGATGGCGAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCA 497791 Query 114971 GTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGA 115030 || || | | | || ||||| |||| |||||| | || | ||| || || || | Sbjct 497790 GTAGCGTCGTAGGCACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCA 497731 Query 115031 AT--ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACT 115088 || ||||| | | |||| | || | |||||||| | ||| || || || ||| || Sbjct 497730 ATGTACGAGCCCT--TGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCT 497673 Query 115089 TTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTAT 115148 | ||||| |||||||| | |||| || ||||||| |||||||| ||||| |||| Sbjct 497672 TGGAGATCTGCGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCA 497613 Query 115149 TTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT-GGTGTACCAGCGTTGAAGAGGGTT 115207 | |||| |||||||| |||||| || ||| | || || || | ||||||||| || Sbjct 497612 TGGCGACGAGGAAGCAAGACGACATCTG-GGCGTGAGGAGTGCCCGAGTTGAAGAGCGTC 497554 Query 115208 GGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGA 115267 |||| ||||| |||| || | ||||| | ||| ||||| | ||| Sbjct 497553 GGTGAGGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCG 497494 Query 115268 ATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 |||| || ||||||||||||| || || ||||| | ||||| ||||| Sbjct 497493 ATGTTGTCGCCGTGAATACCGACGGAAACACGCATCAGCATGTGCTGGGG 497444 >seq7 Length=1807069 Score = 123 bits (136), Expect = 3e-23 Identities = 345/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 125768 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 125827 || ||| |||||||||||| | ||| || | || ||| ||||||| ||||| || Sbjct 104277 ACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCGAAG 104218 Query 125828 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 125885 ||||| |||||||| | |||| | ||| | ||| || || || | || Sbjct 104217 GGGTTGGCCGAGTTCCAGACCTTGTCGTTACCGAGGGCGAC--GAGCAGGCGGTCGGCGA 104160 Query 125886 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGG-AGC 125944 | |||| ||||||| |||| || | |||||| |||||||| | | ||| || Sbjct 104159 CAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCG-AGACGGGCAGG 104101 Query 125945 GCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTG 126004 || || | |||| ||| ||| || | ||||| ||| | ||| || || ||| Sbjct 104100 GCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTG 104041 Query 126005 TCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACTCTTGGTGGAG 126063 ||| ||| | ||| | ||||||| |||| | || || |||||| Sbjct 104040 TCCGGGTGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCACG-CGAAGTCGGTGTGGAG 103982 Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 |||||||||||| |||||||| || || ||||| || || |||||||| || ||||| Sbjct 103981 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTT 103922 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 ||| | |||||| || | || || |||||||||||||| ||||| || ||||| Sbjct 103921 CTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAA 103862 Query 126184 CGCAAAGAGACGCTCAGCAA---AGGAGCGCGACTTTGT-GTCAAACCACTTCATCGCCC 126239 ||| | |||||||| | | |||||||| |||| | | ||| || |||| Sbjct 103861 CGCGATCAGACGCTCTCCGAACGAGGAGCGC----TTGTCGGAGATCCAGCGCAGGGCCC 103806 Query 126240 ACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 | | ||||| |||| ||| || |||| ||| | ||| || Sbjct 103805 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353465595440