Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 113 5e-20 seq3 93.3 4e-14 seq4 91.5 1e-13 >seq6 Length=2071177 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || ||| || |||| || |||||||||||| Sbjct 2048359 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCCTCGAGCTGCTTGCCG 2048300 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||||||||||||||| || || || || || || || ||| Sbjct 2048299 GCGAAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGGATCTTCGACTTG 2048240 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | |||||||||||||| ||| Sbjct 2048239 ACGTTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTC 2048180 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2048179 TTGACGAAGATCTGCAT 2048163 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||||| || || || |||||||| |||| || ||||| |||| Sbjct 2048602 AGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGTCCGTCC 2048543 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || || |||||||||||||| || || || || || || Sbjct 2048542 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2048483 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || || || | ||| | ||| Sbjct 2048482 TGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCCAGAGTGATCGTC 2048423 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || ||||| || ||||| Sbjct 2048422 TTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 64266 TGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCT 64325 |||| || | || ||||| | || ||||||||||||||||| | ||||| ||||||| Sbjct 2048063 TGTAGTCAGAGAGCGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 2048004 Query 64326 GGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC 64385 ||||||| |||||||| || || || || || || ||| ||| || | || ||| Sbjct 2048003 GGTCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCAG 2047944 Query 64386 CGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 | || || || | || | |||||||||||| Sbjct 2047943 ATGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 2047910 >seq3 Length=2964310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||||| || || || |||||||| || | Sbjct 1685841 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1685782 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||||||||| | ||||| ||||||||||||||||| Sbjct 1685781 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGG 1685722 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 || || || || || || || || Sbjct 1685721 GATGCCCTCCTTGTCCTGGATCTT 1685698 >seq4 Length=2739924 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| |||| || |||||||||||| Sbjct 1418365 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1418424 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | ||||| |||||||||||||| || || || || || || || || || Sbjct 1418425 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 1418477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644687579920