Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7 154 1e-32 seq6 87.8 2e-12 >seq7 Length=1807069 Score = 154 bits (170), Expect = 1e-32 Identities = 491/746 (66%), Gaps = 23/746 (3%) Strand=Plus/Plus Query 52093 ACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGA 52152 ||||||||| || ||| ||||||| | |||||||||||||| | || ||||||| | Sbjct 103545 ACGAGCGCTTCTTCATCGAGCACGTCCTCGCGTTCTTCGCCGCGTCGGACGGCATCGTCA 103604 Query 52153 ACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCAATACTTT 52211 || |||||| ||||| | | | ||| | ||| || ||| ||||| ||| || || Sbjct 103605 ACGAGAACCTCGTCGAGCGCTT-CTGCGCCGAGGTCCAGATCTCCGAGGC-CAAGACGTT 103662 Query 52212 -TATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGA 52270 || || || | | || ||| | | ||| |||||| |||| || ||||| || Sbjct 103663 CTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGA 103722 Query 52271 GCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGA---ATGCGTTCGAGCACGT 52327 || | | | | || ||| |||| | | | ||| | || |||| | | Sbjct 103723 -CACGT-ACATCCGC-GACAACGCGCGCCGCCAGTTCCTGTTCCAGGCCATCGACACCAT 103779 Query 52328 GCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC---CGC 52384 || ||| | || ||||| | ||||| || |||||| ||||| | | Sbjct 103780 CCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCTC---CGACAAGCGCTC 103836 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 | || | | ||||| || | || |||||| ||||||||| | || || || ||| Sbjct 103837 CTCGTTCGGAGAGCGTCTGATCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTC 103896 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 || || ||||||| | | || | | ||| | ||||||||||| |||||| ||| Sbjct 103897 GTTCGCGTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAA 103956 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG-A 52563 |||| | || || || ||||| || || ||||| ||||| ||||||||| || || | Sbjct 103957 CGAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTCTTCACCCA 104016 Query 52564 CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623 | || ||| | ||||||||||| | || |||||||||| || Sbjct 104017 CCTCCGCCGCCGTCCTC----ACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCA 104072 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 ||||| ||||||| | || | || ||||| ||| ||| | ||||||||||| Sbjct 104073 AGATCGAGCAGGAGTTCCTGACCGAGGCCCTGCCCGTCTCGCTCATCGGCATGAACGCCA 104132 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-G 52742 || ||||||| |||||||||||||||| || || || ||| | || ||||| | | Sbjct 104133 AGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGCCTGCTCGTCGCCCTCGGTAACG 104192 Query 52743 CCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802 ||| || || ||| | ||| || || || || ||| | | || ||||| ||||| Sbjct 104193 ACAAGGT-CTGGAACTCGGCCAACCCCTTCGATTTCATGGAGATGATCTCGCTGCAGGGC 104251 Query 52803 AAGACCAACTTTTTCGAGAAGCGAGT 52828 ||| ||||||| |||||| ||| || Sbjct 104252 AAGGCCAACTTCTTCGAGTCGCGTGT 104277 >seq6 Length=2071177 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || || | | Sbjct 2048584 GACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCA 2048525 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 |||| || ||||| ||||| || || || || || ||||| ||| || | || | Sbjct 2048524 AAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACA 2048465 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| |||||| ||||| | || | ||| || || || || || || Sbjct 2048464 TTG-TCGATCGTGTCGGACGACTCAACCTCCAGAGTGATCGTCTTCCCCGTGAGGGTCTT 2048406 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2048405 CACGAAGATCTGCAT 2048391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 2048356 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCG 2048297 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 2048296 AAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGGATCTTCGACTTGACG 2048237 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||| | || | || || || |||||||| || Sbjct 2048236 TTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTG 2048177 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2048176 ACGAAGATCTGCAT 2048163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262288340960