Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 170 2e-37 seq7 116 5e-21 >seq2 Length=2999908 Score = 170 bits (188), Expect = 2e-37 Identities = 671/1047 (64%), Gaps = 29/1047 (3%) Strand=Plus/Minus Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307 || || ||||| ||||||||||| || | || || || | ||| || || || ||||| Sbjct 498477 TCGGCAAGACCCTGGACACCGAGACCGACGGGACGGTGGCGCATGTTCGAGTTGCGAGC- 498419 Query 116308 GTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364 ||| ||||| || | || | ||||||| | || || ||||||| ||| Sbjct 498418 --CTCAGGGACGGGGTAGTAGTTGCGGGTGATAACCTGGTCAAGGTTCCTGGTGACGACC 498361 Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 116424 || ||||| || || ||||| | | | | | | | || | || | | Sbjct 498360 TTGGTGATCTCGTGGAGCTTCTTGAAGTTGTAGGTCTTGTTTTCGAAGTCAACGAAGGCA 498301 Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| ||||| || || || || || || | | ||| || || |||||| || Sbjct 498300 GGAAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGCGAAGAGTACTCAATG 498241 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || ||| |||||||| | || || || || ||||| | Sbjct 498240 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 498181 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || |||||||||||||| | || || ||||| || |||| | ||| || Sbjct 498180 TTTGCAGCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGATG 498121 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC------CTC 116657 || ||| | | || | | || | ||| ||| || |||| | ||| Sbjct 498120 GCGAACCACAGCTTCTGGGCCTTGA----TGGTCTTG---CGACCCTTGCCGGCACGCTC 498068 Query 116658 GTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTT 116717 ||| | ||| || ||| ||||| || | | || ||||| || || || Sbjct 498067 GTAGCTCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACTC 498008 Query 116718 ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 116777 | | || || | ||| | ||| | ||| | ||| || ||||||||||||||||| | Sbjct 498007 AGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGA 497948 Query 116778 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837 ||||||||| || ||||||| || || ||| | || || | || || || || Sbjct 497947 GATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCG 497888 Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 116897 | || | ||||| | ||| || || ||||| || || ||||| | |||| | || Sbjct 497887 GAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACC 497828 Query 116898 CTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCAT 116954 ||| ||| |||||| || || | || || |||| | | || ||||| Sbjct 497827 AGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCAT 497768 Query 116955 TGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTG 117012 |||| |||||| | || | ||| || || || || |||||| | ||||| | | Sbjct 497767 AGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCC--CTTGGCGCGG 497710 Query 117013 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTG 117072 | | ||||||||| | ||| || || || ||| ||| ||||| || ||||| | || Sbjct 497709 ATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTG 497650 Query 117073 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 117132 || || ||||||| || ||||| ||||| |||| | |||| ||||||||| |||| Sbjct 497649 AGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGAC 497590 Query 117133 ATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC 117191 || || ||| | || || || | ||||||||| || |||| ||||| |||| || Sbjct 497589 ATCTG-GGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACG 497531 Query 117192 TTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGAT 117251 | ||||| | ||| ||||| | ||| |||| || ||||||||||||| Sbjct 497530 CTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGAC 497471 Query 117252 TGAGACCCGCATAAACATGTATTGGGG 117278 || || ||||| | ||||| ||||| Sbjct 497470 GGAAACACGCATCAGCATGTGCTGGGG 497444 >seq7 Length=1807069 Score = 116 bits (128), Expect = 5e-21 Identities = 342/517 (66%), Gaps = 10/517 (2%) Strand=Plus/Minus Query 127241 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAAT 127300 || ||| |||||||||||| | ||| || | || ||| ||||||| ||||| || Sbjct 104277 ACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCGAAG 104218 Query 127301 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 127358 ||||| |||||||| | |||| | ||| | ||| || || || | || Sbjct 104217 GGGTTGGCCGAGTTCCAGACCTTGTCGTTACCGAGGGCGAC--GAGCAGGCGGTCGGCGA 104160 Query 127359 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGG-AGC 127417 | |||| ||||||| |||| || | |||||| |||||||| | | ||| || Sbjct 104159 CAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCG-AGACGGGCAGG 104101 Query 127418 GCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTG 127477 || || | |||| ||| ||| || | || || ||| | ||| || || ||| Sbjct 104100 GCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTG 104041 Query 127478 TCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTC-CACAGCAAACTCTTGGTGGAG 127536 ||| ||| | ||| | ||||||| ||| || || || |||||| Sbjct 104040 TCCGGGTGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCAC-GCGAAGTCGGTGTGGAG 103982 Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||||||||| |||||||| || || ||||| || || |||||||| || ||||| Sbjct 103981 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTT 103922 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || | || ||||| ||||||||||| ||||| || ||||| Sbjct 103921 CTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAA 103862 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACT 127715 ||| | |||||||| | || ||| | | |||| | | ||| || ||||| | Sbjct 103861 CGCGATCAGACGCTCTCCGAACGAG-GAGCGCTTGTCGGAGATCCAGCGCAGGGCCCAGT 103803 Query 127716 GTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 ||||| |||| ||| || |||| ||| | ||| || Sbjct 103802 CGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507061960880