Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7 150 3e-31 seq2 111 3e-19 >seq7 Length=1807069 Score = 150 bits (166), Expect = 3e-31 Identities = 353/530 (67%), Gaps = 11/530 (2%) Strand=Plus/Minus Query 159641 GACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCG 159700 |||||| | |||||| ||||||| |||||||| || || || |||||||| || Sbjct 104280 GACACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCG 104221 Query 159701 AATGGGTTCTTCACGTGATAGCGCTT--CGGAAATCCGAGAGCCGCCAGCAACCTGTCTG 159758 || ||||| | || || ||| || | ||||| || | |||| | ||| | Sbjct 104220 AAGGGGTTGGCCGAGTTCCAGACCTTGTCGTTA--CCGAGGGCGACGAGCAGGCGGTCGG 104163 Query 159759 CCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGA 159818 | ||||| |||||||| ||||| ||| ||| || || | ||| ||||| | Sbjct 104162 CGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGAGACGGGCA 104103 Query 159819 GCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACAC 159878 | || || | ||| ||||||| ||| |||| ||| || || | | |||| || Sbjct 104102 GGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGA--- 104046 Query 159879 GTTCGTACCCCGGCTTGCCCAAAAT--GTGGTCCTTAAACAGGAGGCACGCAAAGTCGCA 159936 |||| || || | | | ||| | || ||||||||||| |||||| Sbjct 104045 --TCGTGTCCGGGTGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCACGCGAAGTCGGT 103988 Query 159937 GTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCC 159996 ||| || |||||||| |||||||||| ||||||||| | ||||||| ||||||| || Sbjct 103987 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCC 103928 Query 159997 ACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGC 160056 ||| |||||||| || |||| ||| || | || || ||||| ||||| ||||| Sbjct 103927 GCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGC 103868 Query 160057 CGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGC 160116 || ||||| | || | ||| || || |||| | |||| | |||| | ||| Sbjct 103867 GGCGAACGCGATCAGACGCTCTCCGAACGAGGAGCGCTTGTCGGAGATCCAGCGCAGGGC 103808 Query 160117 CCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA 160166 ||| || |||||||| |||||| || ||| |||| ||| | |||| Sbjct 103807 CCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCCTGGAACA 103758 >seq2 Length=2999908 Score = 111 bits (122), Expect = 3e-19 Identities = 287/432 (66%), Gaps = 4/432 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || |||||| |||||| || |||| || || |||||||| | || | || Sbjct 497965 CTTCATGAAGAGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTC 497906 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | ||| ||||||| | ||| || ||| || | |||||||| ||||| ||||| | Sbjct 497905 CTTTCCGTGGTTCTTGCGGAGGTCGAGG-AAGTCGAAGATGTCGGCATGCCAGGGCTCAA 497847 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | ||| | || || || | |||||| ||||||||||| || |||| | | Sbjct 497846 GGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAG 497787 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | | | || ||||| || || | |||||| | | ||||| |||| ||| Sbjct 497786 CGTCGTAGGCACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGT 497727 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 |||||| | || | | |||| |||| || || || || | ||||| || Sbjct 497726 ACGAGCCCTTGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGA 497667 Query 205464 TCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 |||| ||||| ||||| || ||| |||||| || ||||||| || ||| || | Sbjct 497666 TCTGCGCGCAGGTCTTG-AGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCG 497608 Query 205523 ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582 || || |||| || | || || ||| ||||||| || ||||||||| || | Sbjct 497607 ACGAGGAAGCAAGACGACATCTGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAG 497548 Query 205583 GCGTGGCTGAAG 205594 ||||| ||||| Sbjct 497547 GCGTGCGTGAAG 497536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155021090080