Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 134 3e-26 seq4 132 1e-25 seq3 123 6e-23 >seq6 Length=2071177 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | |||| ||| || Sbjct 2048374 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCC 2048315 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| ||| ||| || || ||| Sbjct 2048314 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCC 2048255 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | || || || | ||||| ||| Sbjct 2048254 TGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 2048195 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 2048194 TTGCCGGTCAGAGTCTTGACGAAGATCTG 2048166 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || |||||||||||||| |||| ||||||||| | | || | ||| || Sbjct 2048602 AGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGTCCGTCC 2048543 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| || ||||||||||| || || || || ||| Sbjct 2048542 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2048483 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || |||| ||||||||| Sbjct 2048482 TGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCCAGAGTGATCGTC 2048423 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || Sbjct 2048422 TTCCCCGTGAGGGTCTTCACGAAGATCTG 2048394 Score = 100 bits (110), Expect = 7e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||||| | || | ||||| || |||||||| |||||||||||||| ||||||| Sbjct 2048063 TGTAGTCAGAGAGCGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 2048004 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| || |||||| || ||||||||||| ||| || |||| |||||| | Sbjct 2048003 GGTCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCAG 2047944 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTT 199614 || || || || | ||||| ||||| || ||||| || || Sbjct 2047943 ATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 2047901 >seq4 Length=2739924 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 1418350 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1418409 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || || || || ||| Sbjct 1418410 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1418469 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 1418470 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 1418529 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 1418530 TTACCGGTGAG 1418540 >seq3 Length=2964310 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 1685825 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1685766 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| ||| || || || ||| Sbjct 1685765 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 1685706 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 1685705 TGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1685646 Query 199598 TTACCCGTGAG 199608 || ||||| || Sbjct 1685645 TTGCCCGTCAG 1685635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921328111206