Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7 349 3e-91 seq4 125 7e-24 seq6 123 2e-23 seq3 114 1e-20 >seq7 Length=1807069 Score = 349 bits (386), Expect = 3e-91 Identities = 580/825 (70%), Gaps = 21/825 (3%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| || || || | || |||| || || || | | ||| ||||| ||||||||||| Sbjct 104269 CTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCGAAGGGGTTGGC 104210 Query 132687 TGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | ||| || |||| | |||| || |||||||||| | |||||| || ||||| Sbjct 104209 CGAGTTCCAGACCTTGTCGTTACCGA---GGGCGACGAGCAGGCGGTCGGCGACAAACTC 104153 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 |||||| || ||||| | || || | | | || | || || ||||| || |||| Sbjct 104152 GATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGAGCGAGACGGGCAGGGCCTCGG 104094 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCG-CCGCG 132861 | || || |||||||| ||| || || ||| ||| | | | || | ||| | Sbjct 104093 TCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGAT-CGTGTCCGGG 104035 Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 || || | | || |||| | | ||| || |||||| || | |||||| Sbjct 104034 TGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCACGCGAAGTCGGTGTGGAGACCCTCG 103975 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || ||||| |||||| ||| || | |||||||||||||||||| || |||||| Sbjct 103974 TCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 103915 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || |||| ||||| |||||| ||||||| |||||||||||| ||||| || | | Sbjct 103914 CAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGATC 103855 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 || ||||| ||||||| || ||| || |||||||||||| ||||| |||||||| Sbjct 103854 AGACGCTCTCCGAACGAGGAGCGCTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGCCTTC 103795 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AAC-GGAGTTTCTCTTCCGAG 133158 | |||| ||| || || || |||||||| | |||| ||| || | | | | | Sbjct 103794 TTCTTGATGCAGGGGATGGTGTCGATGGCCTGGAACAGGAACTGGCGGCGCGCGT---TG 103738 Query 133159 GAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCG 133218 || | ||| |||||||||||| ||| ||| | |||||||| | ||||||||| | Sbjct 103737 TCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATG 103678 Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTC 133277 || || |||||||| || | |||||| | ||| || || | || ||| ||||| Sbjct 103677 ATCTGGAAGCCGTAGAACGTCTTGGCCTCGGAGATCTGGACCTC-GGCGCAGAAGCGCTC 103619 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||| || || ||||||||||||||||| |||||||| || || || ||||||| ||| Sbjct 103618 GACGAGGTTCTCGTTGACGATGCCGTCCGACGCGGCGAAGAACGCGAGGACGTGCTCGAT 103559 Query 133338 GAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| |||||||||||| |||| | ||||||||| | ||| || |||| Sbjct 103558 GAAGAAGCGCTCGTTGTCATTCAGCTTGTTGTCCCAGTCGTGGAGGTCGGGGGCGAGGTT 103499 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| ||||||| |||||||||| ||| || |||||||| Sbjct 103498 GATCTCCTCGGCGGTCCAGAACGACGCCTGGGCCTTCTTGTACAT 103454 >seq4 Length=2739924 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || |||||||| |||| |||||| || | |||| | | | |||| | || Sbjct 1418540 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1418482 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || Sbjct 1418481 GTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1418422 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| ||||||||||||||| ||||| |||| || Sbjct 1418421 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 1418362 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 1418361 CCACCTTGTCCTCCGT 1418346 >seq6 Length=2071177 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || |||||| | | Sbjct 2048163 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 2048222 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 2048223 GACACTATTGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCTCCCGACCA 2048281 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| || |||||| |||||||| Sbjct 2048282 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGGACCCTCTCGGACTACAA 2048341 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || || | || || ||| Sbjct 2048342 CATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGT 2048378 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 2048391 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGTCGTCC 2048450 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||| || |||| ||||| ||||| || || ||||||| Sbjct 2048451 GACA-CGATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 2048509 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || ||||| || |||| ||||| ||| |||||||| Sbjct 2048510 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACTACAA 2048569 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| |||||| | || || ||| Sbjct 2048570 CATCCAGAAGGAGTCGACTCTGCATCTCGTCCTCCGT 2048606 Score = 100 bits (110), Expect = 3e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACG 38318 || || ||||| ||||| ||||||||| |||| |||||| | | |||| | | | | Sbjct 2047901 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCTGACACCATCGACAAT 2047960 Query 38319 CTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTAC 38378 |||| || || | ||||| |||||||||||| ||||||| ||||| ||||| | | Sbjct 2047961 GTTAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTTC 2048020 Query 38379 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 || ||||| ||||| || || | ||||| ||| ||||||| Sbjct 2048021 GCCGGCAAGCAGCTTGAGGATGGTCGCACGCTCTCTGACTACA 2048063 >seq3 Length=2964310 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || |||||||| ||||||||| | || |||||| || | |||| | | |||| | || Sbjct 1685635 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAACG-TCAA 1685693 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || || ||||||| ||||| ||||| | ||| || Sbjct 1685694 GTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCCGG 1685753 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| |||||||||||||| ||||| |||| || Sbjct 1685754 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 1685813 Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || | || || ||| || | || || Sbjct 1685814 CCACCTCGTCCTCCGTCTGCGTGGTGG 1685840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172687461120