Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 432 5e-116 seq4 170 2e-37 >seq2 Length=2999908 Score = 432 bits (478), Expect = 5e-116 Identities = 841/1234 (68%), Gaps = 20/1234 (2%) Strand=Plus/Minus Query 6922 CGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAG 6981 ||||||||| |||||||| ||| |||| || | || || || | ||||| | ||| Sbjct 1198150 CGGGGTCATGATACCACCAGCAGTCTCGATACCCATGGAGAGGGGGGCGACGTCGAGGAG 1198091 Query 6982 TAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 | ||||| || | ||| ||||| | | ||||| ||| ||||| | || Sbjct 1198090 CAGGAGGTCCTGGGTGGCCTCGGAGGTCTCACCGTTGAGGATGGAGGCCTGGACGGCGGC 1198031 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACC-GTTAAAAT 7100 ||||| ||||| ||||| |||||||| || | || | || || | || || Sbjct 1198030 ACCGTAGGCGACGGCCTCGTCGGGGTTGATGGAGCGGTTGGGCTCGCGGCCAGAGAACAT 1197971 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 || || | | | || || || ||||| || |||||||||||||| | ||||| | Sbjct 1197970 G-TCGGAGACGAGCTTCTGGATCTTGGGGATACGGGTCGATCCACCGACGAGGACGATCT 1197912 Query 7161 CATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 | || || || | || |||||||| | ||| || || || ||||| || ||||| Sbjct 1197911 CGTTGACGTTGGCCTTGTCGATCTTGGCGTCGCGGAGGACCTTCTCGACGGGCTCCATGG 1197852 Query 7221 ATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA 7280 ||||| | |||| || || ||||| ||||| ||||| || ||||| || |||| Sbjct 1197851 TGGAGCGGAAGAGGTCCTGGCAGAGCTCCTCGAAACGGGCACGAGTGATGGAGGTGTAGA 1197792 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 | || | ||||||| | | ||| || || || || | || || || | || || | | Sbjct 1197791 AGTCGATGCCGTCGAAGAGCGAGTCGATCTCGATCGAGGTCTGAGCGGCAGACGAGAGGG 1197732 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | ||||| || ||||| ||||| || || | |||||| |||||||| | ||| |||| | Sbjct 1197731 TGCGCTTGGCACGCTCGCACGCGGTGCGGAGACGACGGAGGGCACGGGCGTTGCCGGTCA 1197672 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAAT 7457 || ||||| | || || || ||||| | |||||| | || ||| | | | Sbjct 1197671 GGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGGTTGACAAGGCGGTTG---T 1197615 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || |||||||| | ||| || || || || || || ||||| || |||||||| Sbjct 1197614 CAAAGTCCTCACCACCAAGGTGGGTGTCACCGGCAGTAGCCTTGACCTCGAAGATACCCT 1197555 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | |||||| | | | || ||||| || ||||||||||| ||||| || ||||| |||| Sbjct 1197554 CCTCAATGGTCAGAAGGGAGACATCGAAGGTACCACCACCAAGGTCGAAGATGAGAACGT 1197495 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | ||| | || ||||| ||||||||||| ||||| || || || || || || | Sbjct 1197494 TCTTCTCGCCCTCAGACTTCTTGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCGT 1197435 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || ||||| || | || || | || || | || || || || || || || | Sbjct 1197434 TGATGATACGGAGGACCTCAAGACCGGAGATGGTACCGGCGTCCTTGGTGGCCTGACGCT 1197375 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 |||| ||||| |||||||| ||||| || | ||| || | | ||| | |||||| | Sbjct 1197374 GCGAGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCCTTGGAGACGGTTCCACCGAGGT 1197315 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | | || ||| | || ||||| ||| | || ||||| || || ||||| || | | | Sbjct 1197314 AGGCCTCAGCGGTCTCCTTCATCTTGATGAGGACCATGGACGAGATCTCCTCGGGAGAGA 1197255 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT--ATCCGCAG-CACCGG 7874 |||| ||| |||||| | || || | || ||| || ||| | || Sbjct 1197254 ACTGCTTCTCCTCACCGCGGTACTCGACCTGGATGTAGGGCTTGGTTCCCTTGTCA---- 1197199 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || ||||| | | ||| | ||||| ||| ||||||| |||| || ||||| | Sbjct 1197198 --ATGACCTTGAAGGGCCAGTGCTTCATGTCGGACTGGACCTCGGGGTCGGAGAACTTGC 1197141 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||||| |||||||| || || || || ||||| | ||||||||||| ||||||| Sbjct 1197140 GTCCGATGAGACGCTTGGCGTCGAAGACGGTGTTGTACGGGTTCATGGCGACCTGGTTCT 1197081 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| ||||| || || || |||||||| || || ||||| | Sbjct 1197080 TGGCGGCATCTCCGATGAGACGCTC---CGAGTCGGTGAACGCGACATAAGAGGGGGTGG 1197024 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || ||||||||||| || || || ||||||||||| ||||| ||| |||| | Sbjct 1197023 TACGGTTACCCTGGTCGTTCGCGATGATCTCAACGCGGTCGTTCTGCCAAACGGCGACAC 1196964 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||| || || || || | ||||| || || || Sbjct 1196963 ACGAGTAGGTGGTACCAAGGTCAATTCCAATAGC 1196930 >seq4 Length=2739924 Score = 170 bits (188), Expect = 2e-37 Identities = 328/479 (68%), Gaps = 6/479 (1%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | |||| || | ||||| ||| | || ||| Sbjct 1883138 TCCTCGAAACGGGCACGGGTGATGTTGGCCGAGAAGTCGATGCCGTTGTAAAGGGAGTCA 1883197 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | |||| ||| || || | ||| || | || ||||| ||||||||||| |||| Sbjct 1883198 ACCTCAACGGTGGTCTGGGTGACCGAGGAGAGGGTGCGCTTGGCGCGCTCACAAGCCGAG 1883257 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | |||||| |||||||| | || | || || || ||| || || || | ||| Sbjct 1883258 CGGAGACGACGGAGGGCACGAGCGTCGTCAGAGATGTCGGCCTTGTGCTTGCGCTGGAAC 1883317 Query 7427 TCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 || | |||||| ||| ||||| | ||||| || |||||||| | ||| || || Sbjct 1883318 TCGGCCTTGAAGTGCTCG-AGGAGGGTGTTGTCGAAGTCCTCACCACCGAGGTGGGTGTC 1883376 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || ||||| || ||||| | |||| ||| || || | | ||| ||||| || Sbjct 1883377 ACCAGCGGTGGCCTTGACGGCGAAGACACCACCAGTGATCGAGAGGAGCGAGACATCGAA 1883436 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTCTTATCG 7603 |||||||| || ||||| || ||||| || || | || || ||| | | | || Sbjct 1883437 AGTACCACCTCCAAGGTCGAAGATGAGAACCATCTTCTCCTC--CTTGGACTGCGAGTCA 1883494 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 || ||||| ||||| || || || || || || || || ||||| ||| || |||||| Sbjct 1883495 AGGCCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGAACGTCGAGGCCA 1883554 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || | | || || || || || | || ||||| ||||| |||||||| ||||| Sbjct 1883555 GCGATGGCACCGGCGTCCTTGGTGGCGAGACGCTGCGAGTCGTTGAAGTAGGCGGGGAC 1883613 Score = 87.8 bits (96), Expect = 2e-12 Identities = 206/309 (67%), Gaps = 14/309 (5%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC- 7515 ||||| || |||||||| | ||| || || || ||| | ||||| || |||| ||| Sbjct 1848794 TCGAAGTCCTCACCACCAAGGTGGGTGTCACCGTTGGTAGACTTGACCTCGAAGACACCC 1848853 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG---AG 7572 | || || | | | | || | ||| || |||||||| || ||||| | | | | Sbjct 1848854 TTCTGCA-TCTCCAGGATGGAGATATCGAAGGTACCACCTCCAAGGTCGTAGACGGCGAT 1848912 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| || |||| |||| || |||||||| |||| || || || || || Sbjct 1848913 GACGGCCGAGTCGT---------TCTTGTCAAGACCGTAGGCGAGGGCGGCGGCGGTGGG 1848963 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || || | |||||| || || ||||| || | || || || || || || Sbjct 1848964 CTCGTTGATGACACGAAGGACGTCAAGACCAGCGATCTGACCGGCGTCCTTGGTGGCCTG 1849023 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || ||||| ||||| |||||||||||||| || | ||| |||| | |||| ||| || Sbjct 1849024 ACGCTGCGAGTCGTTGAAGTAGGCCGGGACAGTGATGACGGCGTGCTTGACGGGCTTGCC 1849083 Query 7753 GAGATACGA 7761 ||| || || Sbjct 1849084 GAGGTAAGA 1849092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120