Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 145 9e-30 seq7 118 1e-21 >seq2 Length=2999908 Score = 145 bits (160), Expect = 9e-30 Identities = 354/534 (66%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| | ||||| || | ||||||| || || || | || || || Sbjct 497443 CCCCCAGCACATGCTGATGCGTGTTTCCGTCGGTATTCACGGCGACAACATCGAGAAGGT 497502 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||| || |||| ||||| |||| || ||||| Sbjct 497503 CATCGAGACGTACAACCTCATGTCGGAGCGTTACTTCACGCACGCCTCACCGACGCTCTT 497562 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||| | || || || |||| ||||| ||| ||||| | || | |||||||| Sbjct 497563 CAACTCGGGCACTCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGAGGA 497622 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | || || |||| ||| |||| || || || ||||| ||| ||| || Sbjct 497623 CTCCATCGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACGGCCGG 497682 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 ||| ||||| | |||||||| | || | ||||| | |||||| || || || Sbjct 497683 TGGCATCGGTCTCCACATCCACAACATCCGCGCCAAG--GGCTCGTACATTGCTGGCACC 497740 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | ||||| |||| ||||| || | | |||| || || || || Sbjct 497741 AACGGCTACTCGAACGGTATCGTTCCTATGCTCCGTGCCTACGACGCTACTGCTCGTTAC 497800 Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 || |||| | ||| ||| || | |||| |||| |||||||| ||||| Sbjct 497801 GTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACCTTGAGCCCTGGCAT 497860 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || ||| | || ||||| || | || ||||| || | ||||||| || | Sbjct 497861 GCCGACATCTTCGACTTCCTCGACCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCC 497920 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || || ||||||| |||||||||||| | || |||||||||||| | || ||| Sbjct 497921 CGTGACCTCTTCTACGCTCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 497974 >seq7 Length=1807069 Score = 118 bits (130), Expect = 1e-21 Identities = 113/142 (80%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || |||| || || || ||||| ||||||||||| || || ||| ||| | Sbjct 103847 GAGCGTCTGATCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTC-GCGTC 103905 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||||||||||| || |||||||| || ||| |||||||||||||| || Sbjct 103906 CATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCAT 103965 Query 102299 CTCTCGTGACGAGGGACTCCAC 102320 ||||||||||||||| |||||| Sbjct 103966 CTCTCGTGACGAGGGTCTCCAC 103987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742260332960