Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 seq7 96.9 4e-15 seq6 96.9 4e-15 >seq2 Length=2999908 Score = 163 bits (180), Expect = 3e-35 Identities = 636/986 (65%), Gaps = 29/986 (3%) Strand=Plus/Minus Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || |||||||| ||||||||||| | ||| || || |||||| ||| ||||| Sbjct 498477 TCGGCAAGACCCTGGACACCGAGACCGACGGGACGGTGGCGCATGTTCGAGTTGCGAGCC 498418 Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223 |||||||| |||||||| ||| ||| | | || ||| | || || ||| Sbjct 498417 TCAGGGACGGGGTAGTAGTTGCGGGTGATAACCTGGTCAAGGTTCCTGGTGACGACCTTG 498358 Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGG 110283 ||||| || ||||| || | | | | | | || || | || | || | || Sbjct 498357 GTGATCTCGTGGAGCTTCTTGAAGTTGTAGGTCTTGTTTTCGAAGTCAACGAAGGCAGGA 498298 Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG--GTGTATTCCAAAA 110341 ||||| || || ||||| ||||| || | |||||| | || | ||| || | | Sbjct 498297 AGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCA--GGCGAAGAGTACTCAATGA 498240 Query 110342 TTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGT 110401 | || || || | |||||| ||| ||| || | || || ||| ||||| ||| || Sbjct 498239 TCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGGT 498180 Query 110402 T-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 | ||| || ||||| ||||||||| | ||| ||| || || ||||| | | ||| ||| Sbjct 498179 TTGCA-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGATG 498121 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTAC 110517 || ||| | | || | ||| || || |||| | | || | |||||| Sbjct 498120 GCGAACCACAGCTTCTG-GGCCTTGATGGTCTTGCG--ACCCTTGCCGGCACGCTCGTAG 498064 Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577 | ||||| | ||| || |||| || || || || || || || || Sbjct 498063 CTCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACTCAGCG 498004 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTC---CTCAACCCTCTTCATGAACAGGTCAGGA 110634 || || | ||||| ||| | |||| || ||| || | ||||||||| ||||| | Sbjct 498003 GGGCACATGAGGGTCCAGT---CACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAG 497947 Query 110635 ATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694 ||||| | || |||| ||||||||| |||| |||| || | || ||||| ||| Sbjct 497946 ATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGG 497887 Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCC 110754 || || | ||||| | ||| || | ||||| || || || |||| |||| || || Sbjct 497886 AGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACC- 497828 Query 110755 TTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 | | || || |||||| || || || || || || | | || | | |||| Sbjct 497827 --AGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGC 497770 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868 ||||||| || || | || | || || || || ||| || ||||| || Sbjct 497769 ATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGG 497710 Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGT 110927 |||| |||||| || | ||| || ||||| ||| ||| || || || || ||| | Sbjct 497709 ATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCT-T 497651 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 ||| || | || ||||| || || || || |||| |||| | || |||||||| || Sbjct 497650 GAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGA 497591 Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 |||||| | |||| || |||| |||||||| || |||| || || |||| || Sbjct 497590 CATCTGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACG 497531 Query 111048 TTGGGACATCTTGTTGTATGTGTCGA 111073 | ||||| |||||| || |||| Sbjct 497530 CTCCGACATGAGGTTGTACGTCTCGA 497505 Score = 84.2 bits (92), Expect = 3e-11 Identities = 166/246 (67%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 109422 ACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGT 109481 ||| || ||||| ||| |||||| |||| | ||||| || | ||| | || | | Sbjct 499153 ACCAGTCTTGAGTCCACGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGAGAACGA 499094 Query 109482 CGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGC 109541 || || | | | ||| | |||||||||||| || ||||| ||||| || || Sbjct 499093 GGGGTTCGCAAGGTGGATGTTGAGCGACTGAGACTGGTCAATGAACGCGCCACGGTCGGC 499034 Query 109542 CGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGAT 109601 || | ||| |||| | ||| || || ||||||||||||||||| | |||||| Sbjct 499033 AGCGAGGTCAATGACAGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGAT 498974 Query 109602 ATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTT 109661 || |||||||||| ||||| || || ||||| || | | ||||| | ||| Sbjct 498973 GTCGTCGGGAATGTTGGGGATGTGCTGGATGGAGCCTCCGGAGGCGATGATGAGGTTCTT 498914 Query 109662 CATCTC 109667 |||||| Sbjct 498913 CATCTC 498908 >seq7 Length=1807069 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/232 (71%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || ||| || || |||||||| || Sbjct 103986 TGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCG 103927 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAAC-TTCCAGAAAAGAAGATGCCCTCCACACA 119626 | ||||| ||||| ||||||| || ||| || || |||||||||||||| || Sbjct 103926 CGCTTCTTGAGCCAGAAGATGG-ACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGC 103868 Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAG 119682 |||||| |||| |||||||| | || | ||| |||||| || ||| || | Sbjct 103867 GGCGAACGCGATCAGACGCTC-TCCGAACGAGGAGCGCTTGTCGGAGATCCAGCGCAGGG 103809 Query 119683 CCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 |||||| |||||| || |||||||||| || | |||||| | ||| || Sbjct 103808 CCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCCTGGAACAG 103757 >seq6 Length=2071177 Score = 96.9 bits (106), Expect = 4e-15 Identities = 220/323 (68%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGG 11650 |||| |||||||| || ||| |||||||| | ||| || ||||| |||||| | Sbjct 1810716 CGAAGCCGTCCATCTCGACGAGCAGCTGGTTCAGCGTGCTCTCGCGCTCGTCGTTGCCGC 1810775 Query 11651 GCATA---CCACC--TGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 | || || | ||| ||||| | |||| || |||||||| |||||||| | Sbjct 1810776 CGAACTGTCCGCCCTTACCGCGCGCTT--TGCCGATCGCATCAATCTCGTCGATGAAGAT 1810833 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||| ||||| ||| | || | || |||| || || || || ||| || ||| | Sbjct 1810834 GATGCACGGCGCGTTCTT-CTTGGCCGTCGCGAACAGGTCGCGCACGCGCGACGGTCCGA 1810892 Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGAC 11823 |||| ||||||||||| ||||| | | ||| |||| || | ||| || || || | | Sbjct 1810893 CACCGACGAACATCTCGACGAACTCGGATCCAG-ACACCGACAGGAACGGCACCTTGGCC 1810951 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 ||||| || | || || || || ||||||||||| || || | || | || | Sbjct 1810952 TCACCGGCCGTCGCCTTGGCCAGCAGCGTCTTACCCGTTCCCGGGGGGCCGGACAGGATC 1811011 Query 11884 GCGCCACGGGGGATCTTGGCACC 11906 ||||| || ||||||||||| || Sbjct 1811012 GCGCCGCGCGGGATCTTGGCGCC 1811034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975867480400