Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-28 seq7 93.3 5e-14 >seq2 Length=2999908 Score = 141 bits (156), Expect = 1e-28 Identities = 566/881 (64%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | || || || || | |||||| ||| || || || | | || ||||| Sbjct 498250 GTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTT 498191 Query 106567 ACTCTTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625 ||| ||| ||| || ||||||||||||||| |||| || ||||| ||||| | Sbjct 498190 CGACTTGCGGTTTGCA-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGG 498132 Query 106626 ACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCT 106682 | ||| || || ||||| | || | | || | |||| ||| ||| | || Sbjct 498131 CTTCGAGGATGGCGAACCACAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCG 498076 Query 106683 CCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCT 106741 | | |||||| | ||| || || |||||||| |||| ||||| || Sbjct 498075 GCACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCG 498016 Query 106742 GGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAA 106801 || || | || || | || | ||| | ||| | ||| || ||||||||||| Sbjct 498015 GGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAG 497956 Query 106802 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 106861 ||||| | ||||| || | | ||||| || | ||| |||| || | || ||| Sbjct 497955 AGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGG 497896 Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921 || || | || ||||| || | ||| || || ||||| |||||||| |||| ||| Sbjct 497895 TTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCG 497836 Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | | || | | | ||| | | || | || || || || || |||| | | Sbjct 497835 AAGGCACCAGGGCGCTTGTTGCC-ACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGC 497777 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTA 107035 || ||||| |||| ||||| | || | || || || || ||| ||||| | Sbjct 497776 ACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCT- 497718 Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095 |||| | | | |||||||| | || || || || ||| ||| ||||| ||||| Sbjct 497717 -TGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCG 497659 Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155 || | | || || | |||||||||| ||| ||||||||||| |||||| |||||| Sbjct 497658 CAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAG 497599 Query 107156 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 107215 ||| |||||||| | || || || | |||||||| || |||| ||||| || Sbjct 497598 CAAGACGACATCTGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTG 497539 Query 107216 AACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 || || | ||||| || ||| ||||| | ||| || |||| || ||||| Sbjct 497538 AAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGA 497479 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335 || |||| || |||||||| | ||||| ||||| || || |||| |||| Sbjct 497478 ATACCGACGGAAACACGCATCAGCATGTGCTGGGGGCGCTCGGCGATCTTGCCGTCGATG 497419 Query 107336 CGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || | || ||| ||| ||||| |||| ||| ||||| Sbjct 497418 CGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAACCGAAGTA 497378 Score = 105 bits (116), Expect = 8e-18 Identities = 147/199 (74%), Gaps = 9/199 (5%) Strand=Plus/Minus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 || |||||||||||||| || || || || ||||| || || |||||||||| Sbjct 2063361 TGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAGCCCCTGCATGAGACCA 2063302 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 |||||||||| |||| | || || ||| |||||||||||||| || || |||||||| Sbjct 2063301 CGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAAAATGCCTTCCACACAA 2063242 Query 117406 GCAAACGCAAAAAGGCG-CTCGGCGAAGGAGCGAGACTTTGT--GTCAAACCATTTCATT 117462 |||||||||| || || || | ||||| || || |||| || | | ||||| Sbjct 2063241 GCAAACGCAATCAGACGTATCCG-GAAGG-GC---ACCTTGTCCGT-GATGTACTTCATC 2063188 Query 117463 GCCCATTTCGCCTTCTTCT 117481 ||||| | ||||||||||| Sbjct 2063187 GCCCAGTCCGCCTTCTTCT 2063169 >seq7 Length=1807069 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || || || || || || ||||| ||||| |||||||| || Sbjct 103987 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCC 103928 Query 117345 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 |||||||| | ||| | || | ||| ||| || || ||||||||||| ||||| || Sbjct 103927 GCGCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCCCGAGAAGAAGATGCCCTCGACGG 103869 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATT 117462 || ||||| | || ||||| |||| ||| ||| |||| | | ||| || Sbjct 103868 CGGCGAACGCGATCAGACGCTCTCCGAACGAG-GAGCGCTTGTCGGAGATCCAGCGCAGG 103810 Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||||| | |||||||||| || || || | || | |||||| Sbjct 103809 GCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980667254320