Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 143 6e-29 seq3 125 2e-23 seq4 118 2e-21 >seq6 Length=2071177 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | || || | || || ||| Sbjct 2048371 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCCTCG 2048312 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| |||||||| || || ||||| || Sbjct 2048311 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGG 2048252 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| ||||||||| || || |||||||| | ||||| Sbjct 2048251 ATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTG 2048192 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | ||||| Sbjct 2048191 CCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| ||||| || || || ||||| || | || || | || || ||| Sbjct 2048599 ACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGTCCGTCCTCG 2048540 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || || ||||| || ||||| || Sbjct 2048539 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 2048480 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || || || | |||||| Sbjct 2048479 ATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCCAGAGTGATCGTCTTC 2048420 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 2048419 CCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 >seq3 Length=2964310 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 1685822 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1685763 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || ||||| || Sbjct 1685762 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 1685703 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || |||||||| | ||||| Sbjct 1685702 ATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTG 1685643 Query 195112 CCTGTCA 195118 || |||| Sbjct 1685642 CCCGTCA 1685636 >seq4 Length=2739924 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| |||| || || | || || ||| Sbjct 1418353 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1418412 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 1418413 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1418472 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || || | ||||| Sbjct 1418473 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTA 1418532 Query 195112 CCTGT 195116 || || Sbjct 1418533 CCGGT 1418537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481344125806