Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq3 82.4 5e-11 >seq6 Length=2071177 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | ||| | || || ||||| || ||||| || Sbjct 2048353 TCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCGAAG 2048294 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| |||||| |||||| Sbjct 2048293 ATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 2048234 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| ||||| || || || |||||||| || Sbjct 2048233 TCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACG 2048174 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 2048173 AAGATCTGCATA 2048162 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | ||| | || || ||||| ||||| ||||| Sbjct 2048581 TCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAG 2048522 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || || Sbjct 2048521 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTG 2048462 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | |||||| || | || || || || |||||||| |||||||| Sbjct 2048461 TCGATCGTGTCGGACGACTCAACCTCCAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACG 2048402 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 2048401 AAGATCTGCATA 2048390 >seq3 Length=2964310 Score = 82.4 bits (90), Expect = 5e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || ||||| || Sbjct 1685804 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1685745 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1685744 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1685685 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 | |||| || || ||| || || | ||| ||||| || ||||| || Sbjct 1685684 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAG 1685635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633528783504