Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=2999908 Score = 109 bits (120), Expect = 4e-19 Identities = 155/212 (73%), Gaps = 12/212 (6%) Strand=Plus/Minus Query 30027 CATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTT 30086 |||||||| || |||| |||||||| |||| || ||||||||||| ||| ||||| Sbjct 1954617 CATGAGGCTCAC--CTTTCGGGTTCCACGCGCTCATGATGATGCGCCGGTCGGTGGGGTT 1954560 Query 30087 GTTCCTGAT---GAGGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGT 30142 | | |||| | || ||| | ||| ||||| || || ||| | |||| ||| | Sbjct 1954559 CTCCTTGATCTTGCGGATCACCTC----TGCGAGCTGGTCGACGCCCTTGCCCGTGTAAT 1954504 Query 30143 CTGCC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGT 30201 | || | || || | |||||| || ||||| |||| |||||||||||||||||| || Sbjct 1954503 CGTCCTCGCACGTGCC-GTACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGG 1954445 Query 30202 CCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 || ||||| |||||| ||||||| | | ||| Sbjct 1954444 CCGAGGTCGCCCTCTCGCCTGTGCCCAAGGCC 1954413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617510359514