Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq3 136 6e-27 >seq3 Length=2964310 Score = 136 bits (150), Expect = 6e-27 Identities = 315/466 (68%), Gaps = 43/466 (9%) Strand=Plus/Minus Query 81968 AGGCGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCT 82027 ||||||| ||||||||||||||||| ||||| || | ||| ||| ||| |||||| Sbjct 2232433 AGGCGCCCGTCGAGCCGAAGCCGCCGGCGCCGCGCTGCGTGCTGTCGAGGTCGGCGACCT 2232374 Query 82028 CGACGACCGGCACGATCAGGCACTGT--TCGAGGATGATCTGGGCGATGCGATCGCCGGG 82085 || || ||| | || ||| || |||||||||| |||||||||||| ||||| | Sbjct 2232373 CGCGGATGGGCGCCAT--GGCGATGCGCTCGAGGATGAGCTGGGCGATGCGGTCGCCCTG 2232316 Query 82086 CTTGATCTCCACG-------GTCTCCC-CGAAGAAGGGCGCGCC-GAAGACGTCGGCCTG 82136 |||| || || | |||| || | || | | | ||| ||||| | | Sbjct 2232315 GTTGA-CTGTGCGTCAGCTAGACTCCTGCGTTGCAGCTCACTCTTGAACTCGTCGTCATT 2232257 Query 82137 CTTGCCGTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAATCCTCGTCCACCACGCC 82196 ||||| | |||| |||||||||||||||| ||| || ||| || ||||| Sbjct 2232256 ------GTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGCAGTCGACGACGCC 2232203 Query 82197 GGCCAGGACCC----CGATGCC---CTTGACGCCCAGGCCCGAGCGCGGGGCGACGCGGG 82249 ||| |||| ||||||| |||| || | |||||||||||||| |||| ||| Sbjct 2232202 GGC----ACCCGTGTCGATGCCGTGCTTGGCGGCGAGGCCCGAGCGCGGCGCGATGCGCC 2232147 Query 82250 CGTAGGTTCCCTCGGGCGCGGT---GATCGAGAGGCCCGTCGACAGCAGGGCGCGATCGC 82306 |||| || |||| ||| | | |||||||| ||| | ||||| | |||| ||| Sbjct 2232146 CGTACGT---CTCGTGCGGGATCGCGATCGAGATGCCGGCCGACACGGTGCCGCGCCCGC 2232090 Query 82307 CGGGGTTCAGGCGCACCGTCTTCTCGCCGTCGTAATAGACGTCCAGGCCGGCGGCCTTGG 82366 | ||| | || ||| | |||| | |||| | ||| | ||||| | || Sbjct 2232089 ---GCTTCGGCAGCGTCGTGTCCTCGGCTGCGTACAGGTCGTAC---CCGGCCGAGAGGG 2232036 Query 82367 GCGAGCCGCGCGTCGGGAGCTTGGCGGTTTGGGTCAGACGCTTGAC 82412 |||||||||||||||| | ||||||| | || |||| ||||||| Sbjct 2232035 GCGAGCCGCGCGTCGGCATCTTGGCGTTCGGGCTCAGGAGCTTGAC 2231990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709721440312640