Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq3 138 2e-27 >seq3 Length=2964310 Score = 138 bits (152), Expect = 2e-27 Identities = 318/468 (68%), Gaps = 47/468 (10%) Strand=Plus/Minus Query 81125 AGGCGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCT 81184 ||||||| ||||||||||||||||| ||||| || | ||| ||| ||| |||||| Sbjct 2232433 AGGCGCCCGTCGAGCCGAAGCCGCCGGCGCCGCGCTGCGTGCTGTCGAGGTCGGCGACCT 2232374 Query 81185 CGACGACCGGCACGATCAGGCACTGT--TCGAGGATGATCTGGGCGATGCGATCGCCGGG 81242 || || ||| | || ||| || |||||||||| |||||||||||| ||||| | Sbjct 2232373 CGCGGATGGGCGCCAT--GGCGATGCGCTCGAGGATGAGCTGGGCGATGCGGTCGCCCTG 2232316 Query 81243 CTTGATCTCCACG-------GTCTCCC-CGAAGAAGGGCGCGCC-GAAGACGTCGGCCTG 81293 |||| || || | |||| || | || | | | ||| ||||| | | Sbjct 2232315 GTTGA-CTGTGCGTCAGCTAGACTCCTGCGTTGCAGCTCACTCTTGAACTCGTCGTCATT 2232257 Query 81294 CTTGCCGTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAGTCCTCGTCCACCACGCC 81353 ||||| | |||| |||||||||||||||| |||||| ||| || ||||| Sbjct 2232256 ------GTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGCAGTCGACGACGCC 2232203 Query 81354 GGCCAGGACCC----CGATGCC---CTTGACGCCCAGGCCCGAGCGCGGCGCGACGCGGG 81406 ||| |||| ||||||| |||| || | ||||||||||||||||||| ||| Sbjct 2232202 GGC----ACCCGTGTCGATGCCGTGCTTGGCGGCGAGGCCCGAGCGCGGCGCGATGCGCC 2232147 Query 81407 CATAGGTTCCCTCGGGCGCG---GTGATCGAGAGGCCCGTCGACAGCAGGGCGCGATCGC 81463 | || || |||| ||| | | |||||||| ||| | ||||| | |||| | Sbjct 2232146 CGTACGT---CTCGTGCGGGATCGCGATCGAGATGCCGGCCGACACGGTGCCGCG---CC 2232093 Query 81464 CGGGGTTCAG--GCGCACTGTCGTCTCGCCGTCGTAATAGACGTCCAGGCCGGCGGCCTT 81521 || | ||| | ||| |||| |||| | |||| | ||| | ||||| | Sbjct 2232092 CGCGCTTCGGCAGCGTCGTGTC--CTCGGCTGCGTACAGGTCGTAC---CCGGCCGAGAG 2232038 Query 81522 GGGCGAGCCCCGCGTCGGGAGCTTGGCGGTCTGGGTCAGGCGCTTGAC 81569 ||||||||| |||||||| | ||||||| || || ||||| ||||||| Sbjct 2232037 GGGCGAGCCGCGCGTCGGCATCTTGGCGTTCGGGCTCAGGAGCTTGAC 2231990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701363042193280