Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7 331 2e-85 seq2 306 7e-78 >seq7 Length=1807069 Score = 331 bits (366), Expect = 2e-85 Identities = 581/831 (70%), Gaps = 30/831 (4%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| |||||||| | ||| |||| || |||||| |||||||||| ||||||||||| Sbjct 104269 CTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCGAAGGGGTTGGC 104210 Query 47920 TGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCAGGTGATCCGCGACGTACTCGA 47978 | ||| | ||| |||| || | | |||||| | || ||||| |||||| Sbjct 104209 CGAGTTCCAGACCT-TGTCGTTACCGAGGGCGACGAGCAGGCGGTCGGCGACAAACTCGA 104151 Query 47979 TGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGA 48038 |||| | ||||||| || ||||||||| ||||| || ||||||| |||| || | Sbjct 104150 TGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGAGACGGGCAGGGCCTCGGTCA 104091 Query 48039 GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAA-CG----CGGGACTC 48093 | ||||||| ||| |||| ||||| ||| | |||| || | || |||| Sbjct 104090 GGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTGTCCGGG---- 104035 Query 48094 TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCC 48153 ||||| | ||| ||||| || |||| | ||| || ||||| |||| | || Sbjct 104034 TGAGGACG-GCGGCGGAGGTGGGTGA---AGAGGAGGCACGCGAAGTCGGTGTGGAGACC 103979 Query 48154 TTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTT 48213 ||||| || ||||||| |||||||||| ||| || ||||||| || | || || Sbjct 103978 CTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTT 103919 Query 48214 GAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 ||||||||| || | |||||| ||||| ||||||||||||||||| || || |||||||| Sbjct 103918 GAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAACGC 103859 Query 48274 GGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGC 48333 | | || | ||||||||| || | | |||||| ||||||||| || |||||||| || Sbjct 103858 GATCAGACGCTCTCCGAACGAGGAGCGCTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGC 103799 Query 48334 CTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGC-ACTCACCTG 48392 ||||||||||||||| || || || || |||||| |||| || || || | | | | Sbjct 103798 CTTCTTCTTGATGCAGGGGATGGTGTCGATGGCCTGGAACAGGAACTGGCGGCGCGCGT- 103740 Query 48393 CGTC-CGCA---ACATAGGTAG-TGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 ||| || | || | || | |||| ||| | |||| |||| ||||| | ||||| Sbjct 103739 TGTCGCGGATGTACGT--GTCGATGAGGAGC---GAGTACGTCTCCGAGTGGATGTTCTC 103685 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||||||| |||||||| | | ||||||| | | ||| || || | | |||| Sbjct 103684 CATCATGATCTGGAAGCCGTAGAACGTCTTGGCCTCGGAGATCTGGACCTCGGCGCAGAA 103625 Query 48508 TCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 | ||| | || ||||| ||||| || || || || || || ||||| || ||||| || Sbjct 103624 GCGCTCGACGAGGTTCTCGTTGACGATGCCGTCCGACGCGGCGAAGAACGCGAGGACGTG 103565 Query 48568 TTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCC 48624 | | ||| ||||||||||| | || || |||| | || | ||| | | Sbjct 103564 CTCGATGAAGAAGCGCTCGTTGTCATTCAGCTTGTTGTCCCAGTCGTGGAGGTCGGGGGC 103505 Query 48625 CAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 |||| | || || | |||||||| ||||| | || || |||||||| Sbjct 103504 GAGGTTGATCTCCTCGGCGGTCCAGAACGACGCCTGGGCCTTCTTGTACAT 103454 >seq2 Length=2999908 Score = 306 bits (338), Expect = 7e-78 Identities = 1128/1740 (65%), Gaps = 43/1740 (2%) Strand=Plus/Minus Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 || || | ||| || |||||| |||||| ||||| | | | | ||| || || | ||| Sbjct 499083 AGGTGGATGTTGAGCGACTGAGACTGGTCAATGAACGCGCCACGGTCGGCAGCGAGGTCA 499024 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 |||| | | |||| |||| |||||| || |||||| |||| | |||| ||| || || Sbjct 499023 ATGACAGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGATGTCGTCGGGA 498964 Query 212808 AAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCC 212864 | | |||||||| ||| | || || || | | ||| | || | | ||| ||| Sbjct 498963 ATGTTGGGGATGTGCTGGATGGAGCCTCCGGAGGCGATGATGAGGTTCTT---CATCTCC 498907 Query 212865 TCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAG 212924 |||| ||| | ||| | | |||| || || ||| ||| | |||| Sbjct 498906 TCGTCCCAAATGCCGAGGTTGATCAGGTCGCGGAGGAGCCAGGGGCAGACGACAGCGAAG 498847 Query 212925 TCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTG 212984 ||||| || || || | | ||| | | || ||||| ||||||| || |||||| Sbjct 498846 TCACCGGACAGGACACGGCGAGAGTAGAGCATCGAGGTGTAAGGCTCGAAGCACTCGTTC 498787 Query 212985 TTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTC 213044 || |||||||| | || || || ||||||||||| || ||||| ||| | Sbjct 498786 CAGCCAAGAATCTGCGAGGTAGACGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGA 498727 Query 213045 ACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTC 213103 || ||||||| | ||||| ||||| ||||||| |||||| ||| | | | || Sbjct 498726 ACACCGTGCTGGGCGATGTTGGCGC-GAAGCTCGTCCCAGTTCCAGAGGTCGGT--GG-- 498672 Query 213104 CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG 213163 | | ||| ||| | ||| ||| | |||| | | | ||| |||| Sbjct 498671 ---GAACGACACC--CCAAAGGTCGGGCTGGATCTTGCCCTGGGAAATGGGCGAACCCTC 498617 Query 213164 GTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTA 213223 ||| || | ||| ||| |||||| |||| ||| || || | || |||||||| | Sbjct 498616 GTACGAAGGGTACTTGCCGAACTCCTTCGCCATCTCACACGAGGACTCAAGGGCAGCATG 498557 Query 213224 GTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT 213283 ||||||||| || || |||| |||||||| ||||| | || ||||||||| Sbjct 498556 GTAGATGGTCTCGAAGATCTGGAGGTTGAGCTGACGAGCCTCGCGCGAGTCGAAGGGCAT 498497 Query 213284 CATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTC 213342 | || || || || || || |||||||| |||| |||| ||| | ||| | Sbjct 498496 GCGGAGAGCCATGAAAGTG-TCGGCAAGACCCTGGACACCGAGACCGACGGGACGGTGGC 498438 Query 213343 TCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401 || ||| || ||| |||| ||| | |||||| |||||| | ||| | || || Sbjct 498437 GCATGTTCGAGTTGCGAGC-CTCAGGGACGGGGTAGTAGTTGCGGGTGATAACCTGGTCA 498379 Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCC 213461 ||||| | |||| | || ||||||| | | || | || | ||| | | | Sbjct 498378 AGGTTCCTGGTGACGACCTTGGTGATCTCGTGGAGCTTCTTGAAGTTGTAGGTCTTGTTT 498319 Query 213462 CCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGA 213521 || | || || |||| || ||||| ||| |||||||| ||||| ||||| | | Sbjct 498318 TCGAAGTCAACGAAGGCAGGAAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCA 498259 Query 213522 GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTC 213581 | | |||||| |||||||| ||||| |||||| | ||||||||| |||| | Sbjct 498258 GGCGAAGAGTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGC 498199 Query 213582 TGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCT 213641 || ||||| ||||| ||| |||| ||||||||||||||| ||||| |||||||| Sbjct 498198 TGCTGGTTCGACTTGCGGTTTGCAGCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCG 498139 Query 213642 AGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCT 213701 ||||| | || || | ||| || | | |||||||| | | ||| | Sbjct 498138 GTCTGGGCTTCGAGGATGGCGAACCACAGCTTCTGGGCCTTGATGGTCTTGC-GACCCTT 498080 Query 213702 CCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCC 213761 | ||| | |||||| ||||| |||| | ||| || | | || |||| Sbjct 498079 GCCGGC--ACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCT---CGGAGTGAACGTCC 498025 Query 213762 ---AGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA-TCTCTGACTCT 213817 || || || || ||||| ||||||||| ||||||| |||||| ||| ||| | Sbjct 498024 GAGAGGCCGGGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTC-GACACG 497966 Query 213818 CTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTC 213877 || |||||| ||||| | || ||| || ||| ||| ||||| | || | ||| || Sbjct 497965 CTTCATGAAGAGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTC 497906 Query 213878 CACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCAT 213937 | ||| ||| ||||| || || || ||||| |||||||| || ||||| ||||| | Sbjct 497905 CTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAG 497846 Query 213938 GTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCAT 213994 ||||||||| ||||| || | || | ||||| |||||||| || | || Sbjct 497845 GTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGC 497786 Query 213995 GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 || | || || || | || || | ||||| || | |||||||| || || || || Sbjct 497785 GTCGTAGGCACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTA 497726 Query 214055 CGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGAT 214114 |||||| ||| | | |||| ||| ||| || ||||||||||| ||||||||| Sbjct 497725 CGAGCCCTTGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGAT 497666 Query 214115 CATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAG 214174 | |||||| | | | || || ||| ||| | ||| ||| || | | | | Sbjct 497665 CTGCGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGAC 497606 Query 214175 CAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGG 214233 | |||||| ||| | || |||| || | | ||| |||||||| ||||| || || Sbjct 497605 GAGGAAGCAAGACGACATCT-GGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGG 497547 Query 214234 CATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGT 214293 | || | | | | || | ||| |||| ||||| | ||| ||||| || Sbjct 497546 CGTGCGTGAAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGT 497487 Query 214294 GCTTGTGGAT-CTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCT 214352 ||| || | | | || | |||||||||||||||||| | ||| | | || Sbjct 497486 CGCCGTGAATACCGACGGAAACA-CGCATCAGCATGTGCTGGGGGCGCTC--GGCGATCT 497430 Query 214353 TTGGGGCCCT--TGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGG 214410 | | | | ||| |||||||||||||| || |||||||| || |||||| ||||| Sbjct 497429 TGCCGTCGATGCGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAACCGAAGTAGTTGTAGG 497370 Score = 109 bits (120), Expect = 1e-18 Identities = 160/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| ||||| | |||| || || || || ||||||||| |||| ||||| ||| Sbjct 2063376 CAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAGC 2063317 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || |||||| || | || || ||||| || ||||||||||| || || |||||||| Sbjct 2063316 CCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAAA 2063257 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| ||||| || ||||| | || | | |||| ||| | |||||| | | Sbjct 2063256 ATGCCTTCCACACAAGCAAACGCAATCAGAC-GTATCCGGAAG--GGCACCTTGTCCGTG 2063200 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCAT 48354 || | | ||||||||| |||||||||| |||||| || || Sbjct 2063199 ATGTACTTCATCGCCCAGTCCGCCTTCTTCTGGATGCAAGGAAT 2063156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532590405120