Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 140 4e-28 seq4 111 2e-19 seq7 93.3 5e-14 >seq2 Length=2999908 Score = 140 bits (154), Expect = 4e-28 Identities = 393/600 (66%), Gaps = 9/600 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 ||||| ||| |||| ||||| ||| ||| || | || |||| |||| || Sbjct 497378 TACTTCGGTTTCAAGACCCTCGAGCGCTCCTACCTCCTCCGCATCGACGGCAAGATCGCC 497437 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || ||| ||| ||||| | ||||| || | |||| || ||||| || |||| || Sbjct 497438 GAGCGCCCCCAGCACATGCTGATGCGTGTTTCCGTCGGTATTCACGGCGACAACATCGAG 497497 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 ||| | ||||| ||| || ||||| | || |||| ||||| |||| || Sbjct 497498 AAGGTCATCGAGACGTACAACCTCATGTCGGAGCGTTACTTCACGCACGCCTCACCGACG 497557 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 |||||||| | || || || | |||||||| ||||||||| |||||| ||| Sbjct 497558 CTCTTCAACTCGGGCACTCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAG 497617 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 |||||||| ||| |||||||||| | || || | | || ||||| ||||| ||| | Sbjct 497618 GAGGACTCCATCGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACG 497677 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGG 75503 || || || || || | |||||||| | | | |||| | ||||| ||| | Sbjct 497678 GCCGGTGGCATCGGTCTCCACATCCACAACATCCGCGCCA--AGGGCTCGTACATTGCTG 497735 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || || | || | ||||| |||| ||||| || | | |||| || || | Sbjct 497736 GCACCAACGGCTACTCGAACGGTATCGTTCCTATGCTCCGTGCCTACGACGCTACTGCTC 497795 Query 75564 GCTATGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 | || || | | || | ||| ||| || || |||| ||||| | || || Sbjct 497796 GTTACGTCGA-CCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACCTTGAGCCC 497854 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||||||||| ||| | || ||||| || | || ||||| || | || |||| | Sbjct 497855 TGGCATGCCGACATCTTCGACTTCCTCGACCTCCGCAAGAACCACGGAAAGGAGGAGGTT 497914 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || ||||| | | || ||||| | ||||| ||||||||||| || ||| Sbjct 497915 CGTGCCCGTGACCTCTTCTACGCTCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 497974 Score = 105 bits (116), Expect = 8e-18 Identities = 147/199 (74%), Gaps = 9/199 (5%) Strand=Plus/Plus Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC--ACAAAGTCTCGCTCCTTCGCCGA 65078 ||||||||||| | ||||| ||||| | | || |||| || || ||||| | || Sbjct 2063169 AGAAGAAGGCGGACTGGGCGATGAAGTACATC-ACGGACAAGGT---GC-CCTTC-CGGA 2063222 Query 65079 G-CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTA 65137 || || |||||||||| |||||||| || || |||||||||||||| ||| || | Sbjct 2063223 TACGTCTGATTGCGTTTGCTTGTGTGGAAGGCATTTTCTTCTCCGGGTCGTTCGCGGCAA 2063282 Query 65138 TTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTT 65197 | | |||| |||||||||| |||||||||| || || ||||| || || || || Sbjct 2063283 TCTTTTGGCTGAAGAAGCGTGGTCTCATGCAGGGGCTCACTTTCTCGAACGAGCTCATCA 2063342 Query 65198 CCCGAGATGAGGGTCTCCA 65216 |||||||||||||| || Sbjct 2063343 GTCGAGATGAGGGTCTGCA 2063361 >seq4 Length=2739924 Score = 111 bits (122), Expect = 2e-19 Identities = 324/491 (66%), Gaps = 6/491 (1%) Strand=Plus/Minus Query 14342 CGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCT 14401 || || ||| || | | ||||||||||||||||| ||| | || || | | || Sbjct 2540750 CGTTCCATTCCCTCTGTCGCGGATGGTCTCAAGCCAGGTCAGCGCAAGGTCGTCTTCTCT 2540691 Query 14402 TGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGG-CGGCATATGTCGC 14460 || ||| | ||||| ||||| | | || |||||| ||| | | ||| | |||| Sbjct 2540690 TGTTTCAAGAAGAAGATCAAGAACCAGATCAAGGTGCAACAGGTCGTCGGTCT-TGTCAT 2540632 Query 14461 GGACAAGTCTGCGTACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGC 14520 |||||| | ||||||||||| ||||||| || | |||||| || | || Sbjct 2540631 GGACAACGCGGCGTACCACCACGGTGAAGCGTCACTCTACTCCACGATCGTCTCTCTTGC 2540572 Query 14521 AAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTAC 14580 | || | ||| |||||| | ||| | || || ||||| || ||||| Sbjct 2540571 TCAGAGCTTCGTCGGTAGCAACAACGTGAACTTGCTCTCGCCCAACGGTCAGTTCGGTAC 2540512 Query 14581 GCGTCTCATGGGTGGTAAGGATGCTTCTCAGA-CGAGGTACATTTTCACAAAACTTACCA 14639 ||||| |||||||||||||||| | ||| | | ||||||||||| | || || Sbjct 2540511 TCGTCTGCAGGGTGGTAAGGATGCTGC-CAGTGCTCGTTACATTTTCACGAGCATTCCCC 2540453 Query 14640 AGGAGGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGATG 14699 | | |||| ||||| | || |||||| ||||||||||| || || ||| | Sbjct 2540452 GGATCACGCGCACCATCTTCCACCCCGCTGATGACGCGATCCTCAACAACCTGTTCGAAG 2540393 Query 14700 ATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAATG 14759 | |||| || || || || | |||||||| | | || ||||| || | |||| Sbjct 2540392 ACGGACAGCAAATCGAGCCTGAGTACTACATGCCTGTTGTTCCCATGGTCCTTATCAATG 2540333 Query 14760 GAACCGAGGGTATCGGTACGGGTTTCAGTTGCTATGTACCACCATT-CAACCCCAAGGAT 14818 || |||| ||||||||||| || | ||| || | || | ||| ||||||||||||| Sbjct 2540332 GAGCCGACGGTATCGGTACTGGCTGGAGTACCTCGATCCC-CAATTACAACCCCAAGGAT 2540274 Query 14819 ATCAAGGAGAA 14829 || ||||| Sbjct 2540273 GTCGTTGAGAA 2540263 >seq7 Length=1807069 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| || ||| | | Sbjct 103766 GCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCTCC 103825 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 |||| ||| ||| |||| ||||| || | ||||| || || ||||| ||||| Sbjct 103826 GACAAGCGCTC-CTCGTTCGGAGAGCGTCTGATCGCGTTCGCCGCCGTCGAGGGCATCTT 103884 Query 65115 CTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCC 65173 |||||| || || ||| ||| | || | ||| | |||||||| || |||||||| |||| Sbjct 103885 CTTCTCGGGCTCGTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCC 103943 Query 65174 TATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| || || || || || || || |||||||||||| Sbjct 103944 TCACGTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTCCAC 103987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569465771840