Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2 457 1e-123 seq6 172 7e-38 seq5 91.5 2e-13 >seq2 Length=2999908 Score = 457 bits (506), Expect = 1e-123 Identities = 1054/1584 (67%), Gaps = 8/1584 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || || | || || || ||||| ||||| | || ||||| || || || Sbjct 1196930 GCTATTGGAATTGACCTTGGTACCACCTACTCGTGTGTCGCCGTTTGGCAGAACGACCGC 1196989 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| |||| ||||| || |||||||| || || || || || || || || Sbjct 1196990 GTTGAGATCATCGCGAACGACCAGGGTAACCGTACCACCCCCTCTTATGTCGCGTTCACC 1197049 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || |||||| | ||||||||||| || || ||| || |||||||| ||| Sbjct 1197050 GACTCGGAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCGTACAAC 1197109 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||| ||||| |||||||| || || |||||||| || || | ||||| | Sbjct 1197110 ACCGTCTTCGACGCCAAGCGTCTCATCGGACGCAAGTTCTCCGACCCCGAGGTCCAGTCC 1197169 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | || || | | | ||||| || | Sbjct 1197170 GACATGAAGCACTGGCCCTTCAAGGTCATTGACAAGGGAACC---AAGCCCTACATCCAG 1197226 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || || | | ||||||| |||| || || ||||||| || || ||||| ||||| | Sbjct 1197227 GTCGAGTACCGCGGTGAGGAGAAGCAGTTCTCTCCCGAGGAGATCTCGTCCATGGTCCTC 1197286 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || |||||||||||||| || || | | | | ||| ||| || | || || | Sbjct 1197287 ATCAAGATGAAGGAGACCGCTGAGGCCTACCTCGGTGGAACCGTCTCCAAGGCCGTCATC 1197346 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || ||||| || |||||||| | | | || Sbjct 1197347 ACCGTCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCCGGTACCATC 1197406 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | ||||| | || | || ||||| || || || || || || || || || ||| Sbjct 1197407 TCCGGTCTTGAGGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCCATCGCCTACGGT 1197466 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || |||||||| || | || || || || | ||||| || || ||||||||||| Sbjct 1197467 CTCGACAAGAAGTCTGAGGGCGAGAAGAACGTTCTCATCTTCGACCTTGGTGGTGGTACC 1197526 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| ||||| | ||||| | ||||| ||||| || ||||||||||| ||| Sbjct 1197527 TTCGATGTCTCCCTTCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACTGCCGGT 1197586 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGA 196017 || || || || |||||||| || || || || ||| || || || ||| | || Sbjct 1197587 GACACCCACCTTGGTGGTGAGGACTTTGACAACCGCCTTGTCAACCACTTCGTC-CAGGA 1197645 Query 196018 GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAG 196077 |||| || ||||| ||||| || | | || || | | || || ||||| || | Sbjct 1197646 GTTCAAGCGCAAGAACAAGAAGGACCTGACCGGCAACGCCCGTGCCCTCCGTCGTCTCCG 1197705 Query 196078 GACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGAT 196137 || || || || |||||||| || || ||||| ||| | ||||| || | | ||||| Sbjct 1197706 CACCGCGTGCGAGCGTGCCAAGCGCACCCTCTCGTCTGCCGCTCAGACCTCGATCGAGAT 1197765 Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197 || ||| | || ||||| || |||||||| || | || || ||||| ||||| || || Sbjct 1197766 CGACTCGCTCTTCGACGGCATCGACTTCTACACCTCCATCACTCGTGCCCGTTTCGAGGA 1197825 Query 196198 GTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGC 196257 | | | || | || | ||||| || || || | || || || ||||| Sbjct 1197826 GCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAGAAGGTCCTCCGCGACGC 1197885 Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317 ||||| || ||| | || || | || || ||||| || || ||||| |||||||| || Sbjct 1197886 CAAGATCGACAAGGCCAACGTCAACGAGATCGTCCTCGTCGGTGGATCGACCCGTATCCC 1197945 Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377 ||||| || || | | || | | ||| | || ||| | ||||| Sbjct 1197946 CAAGATCCAGAAGCTCGTCTCCGACATGTTCTCTGGCCGCGAGCCCAACCGCTCCATCAA 1198005 Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437 ||| || || || || || || ||||| ||||| ||||| | || ||| |||| Sbjct 1198006 CCCCGACGAGGCCGTCGCCTACGGTGCCGCCGTCCAGGCCTCCATCCTCAACGGTGAGAC 1198065 Query 196438 CAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGA 196497 | | | ||| || || ||||| || || || || ||| | ||| ||||| | || Sbjct 1198066 CTCCGAGGCCACCCAGGACCTCCTGCTCCTCGACGTCGCCCCCCTCTCCATGGGTATCGA 1198125 Query 196498 AACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAA 196557 || || |||||| | ||||| | || | | ||||| || | ||||| ||||| Sbjct 1198126 GACTGCTGGTGGTATCATGACCCCGCTCATCAAGCGCAACACCACCGTCCCGACCAAGAA 1198185 Query 196558 GGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGA 196617 | | |||| || || || || || || || || ||||| | || || || || || Sbjct 1198186 GTCGGAGATCTTCTCGACCTACTCGGACAACCAGCCCGGTGTCCTGATCCAGGTCTACGA 1198245 Query 196618 AGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || || | ||||| | | || || || | ||||| | | || || Sbjct 1198246 GGGTGAGCGTGCCAAGACCAAGGACTGCAACCTCCTCGGCAAGTTCGAGCTCTCCGGCAT 1198305 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || |||| ||| | ||||| || ||||| | || | |||||| | ||||| || || Sbjct 1198306 CCCCCCTGCCCCCCGTGGTGTCCCCCAGATCGAGGTCTCCTTCGACGTCGACGCCAACGG 1198365 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 ||| || ||||||| || ||||||| | | ||||| || || || || Sbjct 1198366 AATCCTGAACGTCAACGCCTCGGACAAGACCACCGGCAAGTCGTCGCGCATCACCATCAC 1198425 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAA 196857 || |||||||| ||||||| |||||||| ||||| ||||| |||||||| || Sbjct 1198426 GAACGACAAGGGTAGGCTTTCCAAGGAGGAGATTGAGAAGATGGTGGCCGATGCGGAGAA 1198485 Query 196858 GTA---CAGGGAAGAAGACGAGGT 196878 ||| || ||| || | |||||| Sbjct 1198486 GTACGCCAAGGAGGACGCCGAGGT 1198509 Score = 89.7 bits (98), Expect = 7e-13 Identities = 283/436 (65%), Gaps = 11/436 (3%) Strand=Plus/Plus Query 78050 CACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTC 78109 ||||| |||| || | || || | || ||||| | | |||||||| ||||| ||| Sbjct 497543 CACGCCTCACCGACGCTCTTCAACTCGGGCACTCCTCACGCCCAGATGTCGTCTTGCTTC 497602 Query 78110 CTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGC 78168 || | || | ||||||||||| || | ||||| |||| || |||| ||| || || Sbjct 497603 CTCGTCGCCATGAAGGAGGACTCCATCGACGGTATCTACGACACCCTCA-AGACCTGCGC 497661 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 ||||| || ||| ||| ||||| || ||||| || || ||| | | || || || Sbjct 497662 GCAGATCTCCAAGACGGCCGGTGGCATCGGTCTCCACATCCACAACATCCGCGCCAAGGG 497721 Query 78229 GTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATT 78288 || ||| || || || || | || | || || |||||||||| | | | Sbjct 497722 CTCGTACATTGCTGGCACCAACGGCTACTCGAACGGTATCGTTCCTATGCTCCGTGCCTA 497781 Query 78289 CAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGC 78342 | | ||||| || || || ||| |||| |||| | | ||| || | ||||| Sbjct 497782 CGACGCTACTGCTCGTTACGTCGACCA---GGGTGGCAACAAGCGCCCTGGTGCCTTCGC 497838 Query 78343 TATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCA 78402 || |||||||| || ||||| ||||| | | || || | || || || ||||| Sbjct 497839 CATCTACCTTGAGCCCTGGCATGCCGACATCTTCGACTTCCTCGACCTCCGCAAGAACCA 497898 Query 78403 GGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTT 78462 || | ||||| | ||| | | || | ||| ||| | ||||| | || || || Sbjct 497899 CGGAAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTACGCTCTCTGGATCTCCGACCTCTT 497958 Query 78463 TATGAAGAGAGTTGAG 78478 |||||| | || ||| Sbjct 497959 CATGAAGCGTGTCGAG 497974 >seq6 Length=2071177 Score = 172 bits (190), Expect = 7e-38 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| ||||| ||||| || || || || ||||| || |||||||||| Sbjct 2048386 GTGGTATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGT 2048445 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| ||||| ||||| || | || |||||| || || ||||| ||||| || |||| Sbjct 2048446 CGTCCGACACGATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCG 2048505 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || |||||||| || ||||| || || ||||| || ||| | || | Sbjct 2048506 ACCAGCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACT 2048565 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || |||||||| ||||| || || || || | || || || ||| Sbjct 2048566 ACAACATCCAGAAGGAGTCGACTCTGCATCTCGTCCTCCGTCTCCGTGGAGGT 2048618 Score = 127 bits (140), Expect = 3e-24 Identities = 126/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 171877 AAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAAC 171936 || ||||| || || || || |||||||||||||| ||||| || ||||| ||||| || Sbjct 2047901 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCTGACACCATCGACAAT 2047960 Query 171937 ATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTT 171996 | || | |||||||| || ||||| || ||||| ||||| ||||| || || || || Sbjct 2047961 GTTAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTTC 2048020 Query 171997 GCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || || || |||||||| ||||| || || ||| |||| |||| Sbjct 2048021 GCCGGCAAGCAGCTTGAGGATGGTCGCACGCTCTCTGACTACA 2048063 >seq5 Length=2706222 Score = 91.5 bits (100), Expect = 2e-13 Identities = 204/300 (68%), Gaps = 10/300 (3%) Strand=Plus/Plus Query 198476 AGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAAAACCCCGAAAAGTACTATGG 198535 ||| |||| |||||| |||||||| ||||| ||||| || |||||||| |||| || | Sbjct 181246 AGCAAAGGGTGAGCTGGAGGAGATCGTTGAGTTTCTGAAGAACCCCGAGAAGTTCTCT-- 181303 Query 198536 AAG--TGGTGCCCGAATCCCACGTGG--TGCTCTTCTCGCCGGTGCCCCGGGTACTGGTA 198591 ||| ||||| |||| || ||||||| | ||| | || ||||| |||| Sbjct 181304 AAGCTTGGTGGTAAGCTCCCGAAAGGCATGCTCTTGAC--CGGCCCTCCTGGTACGGGTA 181361 Query 198592 AAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCT-TCAGTGCTCC 198650 | || | || || ||||| |||| || || || || || || || | | | || Sbjct 181362 AGACGATGCTTGCGCGTGCCGTCGCCGGCGAGGCGGAGGTACCGTTCCTGTTCGCG-TCT 181420 Query 198651 GCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTT 198710 | || |||| ||||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 181421 GGTTCGTCTTTCGACGAGATGTTTGTCGGTGTCGGTGCGAAGCGTGTCCGTGATCTGTTC 181480 Query 198711 GAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGT 198770 | | || || | || || ||||||||||| |||||| | |||||| | ||| Sbjct 181481 GCGGCCGCGCGCAAGAAGGCCCCCGCCATCATCTTCATCGATGAGCTGGACGCTATGGGT 181540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960