Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 116 1e-20 >seq2 Length=2999908 Score = 116 bits (128), Expect = 1e-20 Identities = 179/250 (72%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 ||| ||||| ||| | | ||||||||| || ||||| || | || || || || Sbjct 1233981 GTCCTCCATCGCCTTCACGAGACGACGCTGGATGTAACCCGTCTCGGCAGTCTTGACCGC 1233922 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 || || || ||||| |||||||||||||||| |||||||| | |||| ||| ||| | Sbjct 1233921 AGTGTCGATCAGACCCTCACGACCACCCATAGCGTGGAAGAAGAATTCTTGCGG-CGTCA 1233863 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACT 302746 | || | || | ||| |||||||||| ||||| | |||||| || |||| || || Sbjct 1233862 GACCACGAAGGTACGAGTTCTCAACGAATCCACGAGACTCGGGTCCGTAATCATC---CT 1233806 Query 302747 TGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGT 302806 ||| ||||| ||||| || | || ||||| | || ||||||||||| || ||| Sbjct 1233805 TGGAGAAGTGGGGCAGTGTGCGGTGGCGGAAGCCGAACGGAATACGCTTTCCCTCGACGA 1233746 Query 302807 TCTGCTGTCC 302816 |||| || || Sbjct 1233745 TCTGTTGACC 1233736 Score = 102 bits (112), Expect = 2e-16 Identities = 545/869 (63%), Gaps = 15/869 (2%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||| ||||| || |||||||||||| | | || |||||| || || | | Sbjct 498240 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 498181 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || ||| |||||||| || ||| | ||| || ||||| |||| || || || || Sbjct 498180 TTTGCAGCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGATG 498121 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 | ||| || | |||| || || |||| |||| | ||| || || Sbjct 498120 GCGAACCACAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTGCCGGCACGCTCGTAGCTC 498061 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | | ||||| || | || || || ||||||| | ||||| Sbjct 498060 TCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACTCAGCGGGG 498001 Query 155880 CAAAACAGCGACCAAATTTTATTACCG----ATT--ACACGCTCCATAAATACATCACTC 155933 || | || | ||| | |||| | | ||||||| ||| || | || Sbjct 498000 CACATGAGGGTCCAG------TCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAG 497947 Query 155934 GCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGT 155993 ||| | ||| ||||| ||||| | || |||||| | ||||| ||||| || Sbjct 497946 ATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGG 497887 Query 155994 AGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA 156053 || || | ||| || || || | ||| ||||| || || || || || |||| Sbjct 497886 AGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACCA 497827 Query 156054 TTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATA 156110 | |||| |||||||| || || || |||||||| | | || ||| |||||| Sbjct 497826 GGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATA 497767 Query 156111 GGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACA 156170 |||| ||||| || || ||| ||||| || ||| | ||| || | ||| | Sbjct 497766 GGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGGATG 497707 Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA 156230 || || || || || || || ||||| | | || || || || ||||| ||| | Sbjct 497706 TTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTGAGG 497647 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290 || | | | ||||| || || || || || | ||| | | || |||| || | Sbjct 497646 GTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGACATC 497587 Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 || | | || || || | |||||| || || |||| || || | || || | Sbjct 497586 TGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACGCTCC 497527 Query 156351 GACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAG 156410 ||||| | ||| ||||| | | |||||| | || |||||||||| || || Sbjct 497526 GACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGACGGAA 497467 Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470 || | |||| ||| ||||| || ||||| | ||| || || || || || ||||| Sbjct 497466 ACACGCATCAGCATGTGCTGGGGGCGCTCGGCGATCTTGCCGTCGATGCGGAGGAGGTAG 497407 Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | ||| || || || || || ||||| || Sbjct 497406 GAGCGCTCGAGGGTCTTGAAACCGAAGTA 497378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817260562066