Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7 246 4e-59 seq2 183 4e-40 >seq7 Length=1807069 Score = 246 bits (272), Expect = 4e-59 Identities = 370/514 (72%), Gaps = 20/514 (4%) Strand=Plus/Plus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || |||||| |||| || || ||||||||||||||| || Sbjct 103441 GCAGATTTGGCAGATGTAC-AAGAAGGCCCAGGCGTCGTTCTGGACCGCCGAGGAGATCA 103499 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCA 1455888 |||||| | ||||| | |||||| ||||| ||| |||||||| |||| Sbjct 103500 ACCTCGCCCCCGACCTCCACGACTGGGACAACAAGCTGAATGACAACGAGCGCTTCTTCA 103559 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||||| || || |||||| || |||||||| ||||||||| | | Sbjct 103560 TCGAGCACGTCCTCGCGTTCTT-CGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTC 103618 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| |||||||| | | ||||| ||| ||||| ||||||||| Sbjct 103619 GAGCGCTTCTGCGCCGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATC 103678 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || ||||||||||| |||||||| ||| || ||| Sbjct 103679 ATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAC 103738 Query 1456069 CCGGTCGAGAAGGACCA---CCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 | || | | ||| ||| || | ||||||||||| | || | | | ||| Sbjct 103739 AACG-CGCGCCG--CCAGTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAG 103795 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGC--CTCGACACTTTGCCGAGCG 1456183 |||||||||||||| || |||||| | | || || |||| || | ||||| Sbjct 103796 AAGGCCGACTGGGCCCTGCGCTGGATCTCCGACAAGCGCTCCTCG----TTCGGAGAGCG 103851 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCT 1456241 || ||| || ||||| |||||||||||||| ||||||||| ||| ||| |||||| Sbjct 103852 TCTGATCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTC-GCGTCCATCT 103910 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | ||||||||||||||||||||||||||||| || Sbjct 103911 TCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCT 103944 Score = 190 bits (210), Expect = 3e-42 Identities = 201/258 (78%), Gaps = 10/258 (4%) Strand=Plus/Plus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||| ||||||||| |||||||| | ||||| | | |||| | ||||| || Sbjct 104052 AGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACCGAGGCCCTGCCCGTCT 104111 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||| Sbjct 104112 CGCTCATCGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTTGTCGCCGACCG 104169 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGA---CGGCCAACCCGTTCCCAT 1456697 |||||||| || ||||| | || ||| || ||| |||||||||| ||| | Sbjct 104170 CCTGCTCGTCGCCCTCGG-TAACGACAAGGTCT---GGAACTCGGCCAACCCCTTCGATT 104225 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 |||||| |||||||||| |||||||| ||||||| |||||| || ||| | | || Sbjct 104226 TCATGGAGATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGTGTCTGCGT 104285 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || ||||| | ||||||| Sbjct 104286 ACTCCAAGTCGGGCGTCA 104303 Score = 116 bits (128), Expect = 5e-20 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 724961 CAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC 725020 ||||||| | ||| | ||| ||||||| ||||| |||||| |||| ||||||| || Sbjct 597594 CAACAAGGCGATGGCCATCCTGAACTCTTTTGTTGCCGACATCTTCGAGCGCATCGCTAC 597653 Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080 |||||| | || ||| | |||| | ||| || ||| | |||| |||||||| Sbjct 597654 CGAGGCTAGCAAGCTCGCGTCGTACAACCACCGCTCGACCATCTCCTCGCGTGAGATCCA 597713 Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||||||||| ||||| ||| | | ||| || || ||| ||||||| |||||||||| || Sbjct 597714 GACCGCCGTCCGCCTCATCCTCCCCGGAGAGCTTTCCAAGCACGCCATCTCCGAGGGAAC 597773 Query 725141 CA 725142 || Sbjct 597774 CA 597775 >seq2 Length=2999908 Score = 183 bits (202), Expect = 4e-40 Identities = 349/512 (68%), Gaps = 19/512 (4%) Strand=Plus/Plus Query 259673 GTCGCCGAGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTAC 259732 ||| || || ||||||||| |||||||||||||||| | | | ||| ||||| | |||| Sbjct 497315 GTCTCCAAGAACAAGGAGGCCCTCGACGCTGCCATCATCTATGACCGCGACTTCGCCTAC 497374 Query 259733 TCGTACTTTGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTC 259792 ||||| ||| | |||| | || |||||||| | | || | || Sbjct 497375 AACTACTTCGGTTTCAAGACCCTCGAGCGCTCCTACCTCCTCCGCATCGACGGCAAGATC 497434 Query 259793 GTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGAC 259852 | |||||| |||||| | ||||| |||||||| || | || ||| || Sbjct 497435 GCCGAGCGCCCCCAGCACATGCTGATGCGTGTTTCCGTCGGT-ATTC-----------AC 497482 Query 259853 GTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTC 259912 | |||||| | ||| | || ||| || ||| | ||||||| ||| | ||| Sbjct 497483 GGCGACAACA---TCGAGAAGGTCATCGAGACGTACAACCTCATGTCGGAGCGTTACTTC 497539 Query 259913 ACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGC 259972 || || | || |||||||| || | ||||| || | | | |||| ||||| ||| Sbjct 497540 ACGCACGCCTCACCGACGCTCTTCAACTCGGGCACTCCTCACGCCCAGATGTCGTCTTGC 497599 Query 259973 TTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 260032 || || | | |||||||| || || ||||| || ||||| ||||| |||||| ||| Sbjct 497600 TTCCTCGTCGCCATGAAGGAGGACTCCATCGACGGTATCTACGACACCCTCAAGACCTGC 497659 Query 260033 GCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGCCG 260090 |||| ||||||||| ||||||| ||||||||| | || || ||||| | |||||| Sbjct 497660 GCGCAGATCTCCAAGACGGCCGGTGGCATCGGTCT--CCACATCCACAACATCCGCGCCA 497717 Query 260091 CGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCG 260150 |||| | ||| | || |||||||||||| | || ||||| | || || ||||| || | Sbjct 497718 AGGGCTCGTACATTGCTGGCACCAACGGCTACTCGAACGGTATCGTTCCTATGCTCCGTG 497777 Query 260151 TTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | ||| || || || |||||||||||| Sbjct 497778 CCTACGACGCTACTGCTCGTTACGTCGACCAG 497809 Score = 172 bits (190), Expect = 8e-37 Identities = 187/247 (76%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 ||||||||||||| ||||||||||| ||||||||||| |||||| |||| | | Sbjct 1592385 TCGTACTCGTCCTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACCGGT-----A 1592331 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||||||| ||||| | ||| |||||||||| ||| |||||| |||| || ||| Sbjct 1592330 TC-TCCAACAAGGCCATGGCCATCCTGAACTCGTTCGTCGCCGACATCTTCGAGCGTATC 1592272 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | |||||||| | || ||| | |||| | ||| || ||| | |||||| Sbjct 1592271 GCGACCGAGGCTAGCAAGCTCGCGTCGTACAACCACCGCTCGACCATCTCGTCCCGCGAG 1592212 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 |||||||||||||| ||||| ||| | | ||| || ||| ||| ||||||| |||| ||| Sbjct 1592211 ATCCAGACCGCCGTTCGCCTCATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCTGAG 1592152 Query 725136 GGCACCA 725142 ||||||| Sbjct 1592151 GGCACCA 1592145 Score = 132 bits (146), Expect = 7e-25 Identities = 217/308 (70%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGA-CGTGTTGCAGGC 332934 |||||||| || || ||| ||| | | |||||||| | ||| | | ||||||| || Sbjct 1628148 CGCAGGATCGCGCAGCGGGACTGGATAGGCTCGATGATC-TTGTTGCTCATGTTGCATGC 1628206 Query 332935 CAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGC 332994 || || || || ||||| || | | | ||||| || ||| || ||||| || || Sbjct 1628207 GAGCGCGAATCGGGTCGTGTTCGAGTAGATCTCCATCGTGCGCCGCAGCGCCTGCTGTGC 1628266 Query 332995 CGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 ||| ||| | || ||| |||||||||||||||||||||||||| ||||| |||| | Sbjct 1628267 GCCCGCCGTCATGCTGTCCGCCTCGTCGAGGATGATGATCTTGTGCCGCCCCGGCGG--G 1628324 Query 333055 ATCAACCCTTTTCGAGGCGTG--GTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGC 333112 | | | | || || ||| | | ||||| | || ||||||||||| | |||||| Sbjct 1628325 AGCGTCACCTTGCGCTGCGCGAAGGACTTGATTTTATTCCGCACGACGTCGATTCCGCGC 1628384 Query 333113 TCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGC 333172 ||||| ||||| || || || |||||| | || | || | |||||||| || || Sbjct 1628385 TCGTCAGACGCATTCAGCTCAAGCACGCCTTCCCTGTACGCGTCGCCCAAGAGCGCGTGC 1628444 Query 333173 GCCAGGCA 333180 || ||||| Sbjct 1628445 GCGAGGCA 1628452 Score = 105 bits (116), Expect = 1e-16 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC-CAACCGGGTGACCATTGATATGGCG 263235 ||||||| ||| |||||| || |||||| | | || || || | ||||| | || Sbjct 498975 TCAAGGCCATCTACAAGACTGTCTGGGAGATCTCGCAGAAGGCTGTC-ATTGACCTCGCT 499033 Query 263236 GCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCG 263295 |||||||| | | | | |||||| |||||||||||| | |||| || |||| Sbjct 499034 GCCGACCGTGGCGCGTTCATTGACCAGTCTCAGTCGCTCAACATCCACCTTGCGAACCCC 499093 Query 263296 ACGGCCGAG-AGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGG 263354 || | | ||| |||||||||||||| ||| | ||| || || ||||||||||| Sbjct 499094 TCGTTCTCGCAGC-TCACGTCGATGCACTTCTACGGCTGGAAGCGTGGACTCAAGACTGG 499152 Query 263355 CATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408 ||||| || |||||||| || || ||||||||||| || |||||| |||| Sbjct 499153 TGCCTACTACCTCCGCACCCGCCCTGCCGCCAACGCCATCCAGTTCACCATCGA 499206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809463866916