Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-23 seq7 86.0 9e-12 >seq2 Length=2999908 Score = 125 bits (138), Expect = 1e-23 Identities = 252/371 (68%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 ||||||||||| ||| || |||||||||| ||| || | ||||| || || ||||| Sbjct 2063376 CAGGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAGC 2063317 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || |||| ||||||||||| || |||||||| || || || || || || || ||||| Sbjct 2063316 CCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAAA 2063257 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA------CTTGTATCATTA 39790 |||||||| || ||||| |||| || | | |||| || ||||| | | | Sbjct 2063256 ATGCCTTCCACACAAGCAAACGCAATCAGAC-GTATCCGGAAGGGCACCTTGT-CCGTGA 2063199 Query 39791 TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||| ||||| ||||| || || ||||||| | ||||| || |||| || | Sbjct 2063198 TGT----ACTTCATCGCCCAGTCCGCCTTCTTCTGGATGCAAGGAATGTTTTCCATTCCT 2063143 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 || || || | | || || | | |||| || || || || || |||||||| || Sbjct 2063142 TTGAATAGGAAGTCCTTCTCGGCCTTGTCTTGGACGTACGTCTCAATCAACAGACTGTAG 2063083 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 |||| | ||||| | || ||| |||| || | || || || ||||||| Sbjct 2063082 GTTTCGGCATGGACTTGCTCGATCATGGTCTGGAACGCATAGAACGCTCGCGCTTCAGCG 2063023 Query 39971 ATTTGTACCTC 39981 ||||| ||||| Sbjct 2063022 ATTTGGACCTC 2063012 >seq7 Length=1807069 Score = 86.0 bits (94), Expect = 9e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| |||||||| || || ||||| || | | || | ||||| || || ||||| Sbjct 104002 GCACGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAG 103943 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || || ||||| |||||||| || |||| || || || || || ||||| Sbjct 103942 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAA 103883 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG 39775 |||||| || || || || || || | || | ||||||| Sbjct 103882 GATGCCCTCGACGGCGGCGAACGCGATCAGACGCTCTCCG 103843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908645445520