Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 136 5e-27 >seq2 Length=2999908 Score = 136 bits (150), Expect = 5e-27 Identities = 565/881 (64%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | || || || || | |||||| ||| || || || | | || ||||| Sbjct 498250 GTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTT 498191 Query 111340 ACTCTTCTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398 ||| ||| ||| || ||||||||||||||| |||| || ||||| ||||| | Sbjct 498190 CGACTTGCGGTTTGCA-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGG 498132 Query 111399 ATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCT 111455 || ||| || || ||| | | || | | || | |||| ||| ||| | || Sbjct 498131 CTTCGAGGATGGCGAACCACAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCG 498076 Query 111456 CCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCT 111514 | | |||||| | ||| || || |||||||| |||| ||||| || Sbjct 498075 GCACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCG 498016 Query 111515 GGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAA 111574 || || | || || | || | ||| | ||| | ||| || ||||||||||| Sbjct 498015 GGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAG 497956 Query 111575 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 111634 ||||| | ||||| || | | ||||| || | ||| |||| || | || ||| Sbjct 497955 AGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGG 497896 Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 || || | || ||||| || | ||| || || ||||| |||||||| |||| ||| Sbjct 497895 TTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCG 497836 Query 111695 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 111750 | | || | | | ||| | | || | || || || || || |||| | | Sbjct 497835 AAGGCACCAGGGCGCTTGTTGCC-ACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGC 497777 Query 111751 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTA 111808 || ||||| |||| ||||| | || | || || || || ||| ||||| | Sbjct 497776 ACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCT- 497718 Query 111809 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 111868 |||| | | | |||||||| | || || || || ||| ||| ||||| ||||| Sbjct 497717 -TGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCG 497659 Query 111869 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 111928 || | | || || | |||||||||| ||| ||||||||||| |||||| |||||| Sbjct 497658 CAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAG 497599 Query 111929 CAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 111988 ||| |||||||| | || || || | |||||||| || |||| ||||| || Sbjct 497598 CAAGACGACATCTGGGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTG 497539 Query 111989 AACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048 || || | ||||| || ||| ||||| | ||| || |||| || ||||| Sbjct 497538 AAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGA 497479 Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGC 112108 || |||| | || ||||| | ||||| ||| ||| || || |||| |||| Sbjct 497478 ATACCGACGGAAACACGCATCAGCATGTGCTGGGGGCGCTCGGCGATCTTGCCGTCGATG 497419 Query 112109 CGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 || | || ||| ||| ||||| |||| ||| ||||| Sbjct 497418 CGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAACCGAAGTA 497378 Score = 107 bits (118), Expect = 2e-18 Identities = 146/198 (74%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 || |||||||||||||| || || || || ||||| || || |||||||||| Sbjct 2063361 TGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGTGAGCCCCTGCATGAGACCA 2063302 Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 122790 |||||||||| |||| | || || ||| |||||||||||||| || || |||||||| Sbjct 2063301 CGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAAGAAAATGCCTTCCACACAA 2063242 Query 122791 GCAAACGCAAAAAGGCGT-TCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848 |||||||||| || ||| || | ||||| || || ||| | | | ||||| | Sbjct 2063241 GCAAACGCAATCAGACGTATCCG-GAAGG-GC---ACCTTGTCCGTGATGTACTTCATCG 2063187 Query 122849 CCCATTTCGCCTTCTTCT 122866 |||| | ||||||||||| Sbjct 2063186 CCCAGTCCGCCTTCTTCT 2063169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031858692800