Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 190 3e-43 seq7 122 1e-22 >seq2 Length=2999908 Score = 190 bits (210), Expect = 3e-43 Identities = 399/590 (68%), Gaps = 15/590 (3%) Strand=Plus/Minus Query 118977 TCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACC 119036 || ||||| || || || | | ||||| | ||| | ||| | ||| | ||| || Sbjct 498027 TCCGAGAGGCCGGGGCACTCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACA 497968 Query 119037 CGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT 119096 ||||||||||||||||| | ||||||||| || ||||||| || || ||| | || Sbjct 497967 CGCTTCATGAAGAGGTCGGAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCC 497908 Query 119097 TCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCC 119156 || | || || || || | || | ||||| | ||| || || ||||| || || Sbjct 497907 TCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCA 497848 Query 119157 AGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCA 119210 ||||| | |||| | || | | || ||| |||||| || || | ||| Sbjct 497847 AGGTAGATGGCGAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCA 497791 Query 119211 GTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGA 119270 || |||| | |||| ||||| |||| |||||| | || | ||| || || || | Sbjct 497790 GTAGCGTCGTAGGCACGGAGCATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCA 497731 Query 119271 AT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 119328 || ||||| | | |||| | || | ||||||||| | ||| || || || ||| || Sbjct 497730 ATGTACGAGCCCT--TGGCGCGGATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCT 497673 Query 119329 TTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 119388 | ||||| |||||||| | |||| || ||||||| || ||||| ||||| |||| Sbjct 497672 TGGAGATCTGCGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCA 497613 Query 119389 TTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTT 119447 | |||| ||||||||| |||||| || ||| || || || || | ||||||||| || Sbjct 497612 TGGCGACGAGGAAGCAAGACGACATCTG-GGCGTGAGGAGTGCCCGAGTTGAAGAGCGTC 497554 Query 119448 GGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGA 119507 |||| ||||| |||| || | ||||| || ||| ||||| | ||| Sbjct 497553 GGTGAGGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCG 497494 Query 119508 ATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 |||| || ||||||||||||| || || ||||| | ||||| ||||| Sbjct 497493 ATGTTGTCGCCGTGAATACCGACGGAAACACGCATCAGCATGTGCTGGGG 497444 >seq7 Length=1807069 Score = 122 bits (134), Expect = 1e-22 Identities = 343/517 (66%), Gaps = 10/517 (2%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||| |||||||||||| | ||| || | || ||| ||||||| ||||| || Sbjct 104277 ACACGCGACTCGAAGAAGTTGGCCTTGCCCTGCAGCGAGATCATCTCCATGAAATCGAAG 104218 Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854 ||||| |||||||| | ||| | || | | ||| || || || | || Sbjct 104217 GGGTTGGCCGAGTTCCAGACCTTGTCGTTAC--CGAGGGCGACGAGCAGGCGGTCGGCGA 104160 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGG-AGC 129913 | |||| ||||||| |||| || || |||||| |||||||| | | ||| || Sbjct 104159 CAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCG-AGACGGGCAGG 104101 Query 129914 GCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTC 129973 || || | |||| ||| ||| || | || || ||| | ||| || || || Sbjct 104100 GCCTCGGTCAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTG 104041 Query 129974 TCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACTCCTGGTGGAG 130032 |||| | ||| | ||| | ||||||| |||| | || || |||||| Sbjct 104040 TCCGGGTGAGGACGGCGGCGGAGGTGGGTGAAGAGGAGGCACG-CGAAGTCGGTGTGGAG 103982 Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092 |||||||||||| |||||||| || || ||||| || || |||||||| || ||||| Sbjct 103981 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTT 103922 Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 ||| | |||||| || | || ||||| ||||||||||| ||||| || ||||| Sbjct 103921 CTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAA 103862 Query 130153 CGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACT 130211 ||| | |||||||| | || ||| | | |||| | | ||| || ||||| | Sbjct 103861 CGCGATCAGACGCTCTCCGAACGAG-GAGCGCTTGTCGGAGATCCAGCGCAGGGCCCAGT 103803 Query 130212 GCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 ||||| |||| ||| || |||| ||| | ||| || Sbjct 103802 CGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 103766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435060852080