Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 167 3e-36 seq7 118 1e-21 >seq2 Length=2999908 Score = 167 bits (184), Expect = 3e-36 Identities = 360/535 (67%), Gaps = 9/535 (2%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| | ||||| || || |||||||||| || || |||| || || Sbjct 497443 CCCCCAGCACATGCTGATGCGTGTTTCCGTCGGTATTCACGGCGACAACATCGAGAAGGT 497502 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | ||||| ||| || ||||| | || |||| ||||| |||| || ||||| Sbjct 497503 CATCGAGACGTACAACCTCATGTCGGAGCGTTACTTCACGCACGCCTCACCGACGCTCTT 497562 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| | || || || |||| ||||| ||||||||| |||||| |||||||| Sbjct 497563 CAACTCGGGCACTCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGAGGA 497622 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||||||||| | || || | | || ||||| ||||| ||| ||| || Sbjct 497623 CTCCATCGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACGGCCGG 497682 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 104518 || || || | |||||||| | | | |||| | ||||| ||| || || Sbjct 497683 TGGCATCGGTCTCCACATCCACAACATCCGCGCCA--AGGGCTCGTACATTGCTGGCACC 497740 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || | || | ||||| |||| ||||| || | | |||| || || || || Sbjct 497741 AACGGCTACTCGAACGGTATCGTTCCTATGCTCCGTGCCTACGACGCTACTGCTCGTTAC 497800 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | || | | ||| | | | || | |||| |||| |||||||| ||||| Sbjct 497801 GTCGACCAGGGT-GGCAACAAGCGCCCTGGTGCCTTCGCCATCTACCTTGAGCCCTGGCA 497859 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 || || ||| | || ||||| || | || ||||| || | ||||||| || Sbjct 497860 TGCCGACATCTTCGACTTCCTCGACCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGC 497919 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 ||| || ||||||| |||||||||||| | || |||||||||||| | || ||| Sbjct 497920 CCGTGACCTCTTCTACGCTCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 497974 >seq7 Length=1807069 Score = 118 bits (130), Expect = 1e-21 Identities = 113/142 (80%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || |||| || || || ||||| ||||||||||| || || ||| ||| | Sbjct 103847 GAGCGTCTGATCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTC-GCGTC 103905 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | |||||||||||||| || |||||||| || ||| |||||||||||||| || Sbjct 103906 CATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCAT 103965 Query 94923 CTCTCGTGACGAGGGACTCCAC 94944 ||||||||||||||| |||||| Sbjct 103966 CTCTCGTGACGAGGGTCTCCAC 103987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260668766320